RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 ADCY5O95622 1261 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 GABRG2P18507 467 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 CD70P32970 193 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 RDXP35241 583 aaKnown RBP13.67□□□□□ -0.22
APEX1-208ENST00000554813 PBX1P40424 430 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 PRKCIP41743 596 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 IL12RB1P42701 662 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 ATP11AP98196 1134 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 LMAN2Q12907 356 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 SLC12A1Q13621 1099 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
APEX1-208ENST00000554813 OTUD1Q5VV17 481 aaPredicted RBP13.67□□□□□ -0.22
APEX1-208ENST00000554813 KIAA1211LQ6NV74 962 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 FBXL22Q6P050 247 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 MON1BQ7L1V2 547 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 KBTBD6Q86V97 674 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 CCAR2Q8N163 923 aaKnown RBP13.67□□□□□ -0.22
APEX1-208ENST00000554813 DCLK2Q8N568 766 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 EMC1Q8N766 993 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 C3orf20Q8ND61 904 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 OLIG1Q8TAK6 271 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 RXFP2Q8WXD0 754 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 LMLNQ96KR4 655 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 SPACA7Q96KW9 195 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 ADAM33Q9BZ11 813 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 TTYH3Q9C0H2 523 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 HAUS4Q9H6D7 363 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 INVSQ9Y283 1065 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 RAD54BQ9Y620 910 aa13.67□□□□□ -0.22
APEX1-208ENST00000554813 BZW2Q9Y6E2 419 aaKnown RBP13.67□□□□□ -0.22
APEX1-208ENST00000554813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.66□□□□□ -0.22
APEX1-208ENST00000554813 A0A1B0GVM2 712 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 TCAF2A6NFQ2 919 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 C2CD4BA6NLJ0 364 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 DCLK1O15075 740 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 CBFA2T2O43439 604 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 ZNF217O75362 1048 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 ASLP04424 464 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 EPHX1P07099 455 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 RFC1P35251 1148 aaPredicted RBP13.66□□□□□ -0.22
APEX1-208ENST00000554813 P2RY2P41231 377 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 PTPN9P43378 593 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 ST8SIA6P61647 398 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 ZNF177Q13360 481 aaPredicted RBP13.66□□□□□ -0.22
APEX1-208ENST00000554813 ARL13BQ3SXY8 428 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 PLK5Q496M5 336 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 CCDC14Q49A88 953 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 FSCBQ5H9T9 825 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 TRNP1Q6NT89 227 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 DNAJC24Q6P3W2 148 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 BNIPLQ7Z465 357 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 MCOLN2Q8IZK6 566 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 JOSD2Q8TAC2 188 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 CYB5D2Q8WUJ1 264 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 CPLX3Q8WVH0 158 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 SYN2Q92777 582 aaPredicted RBP13.66□□□□□ -0.22
APEX1-208ENST00000554813 IGSF8Q969P0 613 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 HAPLN3Q96S86 360 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 SYT11Q9BT88 431 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 DUSP15Q9H1R2 295 aaPredicted RBP13.66□□□□□ -0.22
APEX1-208ENST00000554813 CD248Q9HCU0 757 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 SUN2Q9UH99 717 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 CAPN11Q9UMQ6 739 aa13.66□□□□□ -0.22
APEX1-208ENST00000554813 LUC7L2Q9Y383 392 aaKnown RBP13.66□□□□□ -0.22
APEX1-208ENST00000554813 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.222e-8■□□□□ 10.2
APEX1-208ENST00000554813 DMDP11532 3685 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 RIF1Q5UIP0 2472 aaKnown RBP13.65□□□□□ -0.22
APEX1-208ENST00000554813 TMCO5BA8MYB1 307 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 LRP3O75074 770 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 CLDN11O75508 207 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 GZMAP12544 262 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 DESP17661 470 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 NDUFV2P19404 249 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 GPD1P21695 349 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 CSKP41240 450 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 CDH4P55283 916 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 ZBED6P86452 979 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 PTPRNQ16849 979 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 CDO1Q16878 200 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 FUT11Q495W5 492 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 C5orf22Q49AR2 442 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 PITRM1Q5JRX3 1037 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 DCUN1D2Q6PH85 259 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 WDR59Q6PJI9 974 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 STRADAQ7RTN6 431 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 ZNF571Q7Z3V5 609 aaPredicted RBP13.65□□□□□ -0.22
APEX1-208ENST00000554813 C14orf80Q86SX3 495 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 FAM131BQ86XD5 332 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 RLN3Q8WXF3 142 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 CENPIQ92674 756 aaPredicted RBP13.65□□□□□ -0.22
APEX1-208ENST00000554813 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 XPO4Q9C0E2 1151 aaKnown RBP13.65□□□□□ -0.22
APEX1-208ENST00000554813 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
APEX1-208ENST00000554813 INTS6Q9UL03 887 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms