RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PKD2L2Q9NZM6 624 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MALT1Q9UDY8 824 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RABGEF1Q9UJ41 708 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FBXW2Q9UKT8 454 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NR2E3Q9Y5X4 410 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NOTCH3Q9UM47 2321 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CPDO75976 1380 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SERPINB5P36952 375 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PPP2R2BQ00005 443 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CSHL1Q14406 222 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 LARP4BQ92615 738 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C3orf49Q96BT1 292 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PBKQ96KB5 322 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SIKE1Q9BRV8 207 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C14orf93Q9H972 538 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PRDM16Q9HAZ2 1276 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 STARD7Q9NQZ5 370 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CLDND1Q9NY35 253 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NCAPD3P42695 1498 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FAM86B1E9PN63 330 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TYMPP19971 482 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ACTR2P61160 394 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CWF19L1Q69YN2 538 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SHCBP1Q8NEM2 672 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SLC25A36Q96CQ1 311 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 AVENQ9NQS1 362 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GMNCA6NCL1 334 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 APOL1O14791 398 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 STX7O15400 261 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PALMO75781 387 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CPA3P15088 417 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FCHO2Q0JRZ9 810 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DLG1Q12959 904 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 BMPR2Q13873 1038 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 EFCAB12Q6NXP0 572 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CFAP52Q8N1V2 620 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 IRF2BPLQ9H1B7 796 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SH3BP4Q9P0V3 963 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ADAMTS1Q9UHI8 967 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 VPS28Q9UK41 221 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 USP42Q9H9J4 1324 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MGAT4DA6NG13 374 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZSCAN5CA6NGD5 496 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF185O15231 689 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 OPN1LWP04000 364 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF37AP17032 561 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SOX6P35712 828 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MCAMP43121 646 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SLC20A2Q08357 652 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DCDC5Q6ZRR9 648 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MSANTD1Q6ZTZ1 278 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 COLGALT2Q8IYK4 626 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RXFP2Q8WXD0 754 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZSCAN5AQ9BUG6 496 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 COLEC11Q9BWP8 271 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 BEX2Q9BXY8 128 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 BEX1Q9HBH7 125 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF233A6NK53 670 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C9JVG2 144 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MCIDASD6RGH6 385 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 OR6B1O95007 311 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FAM107AO95990 144 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CBLP22681 906 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CYP2C18P33260 490 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ETF1P62495 437 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SPATA6LQ8N4H0 392 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SH2D3CQ8N5H7 860 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MRPS31Q92665 395 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM2Q9C040 744 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DIABLOQ9NR28 239 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 A0A096LPK6 155 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ACADSP16219 412 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FGFR3P22607 806 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 USP10Q14694 798 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MORF4L2Q15014 288 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CATSPER2Q96P56 530 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CD248Q9HCU0 757 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 UCKL1Q9NWZ5 548 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PPP1R14DQ9NXH3 145 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MID2Q9UJV3 735 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DNMT3LQ9UJW3 386 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PCDHA4Q9UN74 947 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GPC6Q9Y625 555 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SLC33A1O00400 549 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NCAM2O15394 837 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NTRK1P04629 796 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 HSD3B1P14060 373 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MTMR1Q13613 665 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SMAD2Q15796 467 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 KCNT1Q5JUK3 1230 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FAM43BQ6ZT52 329 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MCATQ8IVS2 390 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 OR10H5Q8NGA6 315 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC51Q96ER9 411 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PAGE5Q96GU1 130 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 OXCT2Q9BYC2 517 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CHIAQ9BZP6 476 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SF3B1O75533 1304 aaKnown RBP eCLIP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CRXO43186 299 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms