RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 EPHB6O15197 1021 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 XPOTO43592 962 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 MAFKO60675 156 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 CLASP2O75122 1294 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 NOL4O94818 638 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 ITGB3P05106 788 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 C8BP07358 591 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 PTPN1P18031 435 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 CYP3A5P20815 502 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 LRPAP1P30533 357 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 STAT5AP42229 794 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 PIK3CAP42336 1068 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 MYL6P60660 151 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 RBP5P82980 135 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 DSC1Q08554 894 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 BIRC3Q13489 604 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 SHHQ15465 462 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 EXOC3L4Q17RC7 722 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 PAN2Q504Q3 1202 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 RNF187Q5TA31 235 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 C9orf57Q5W0N0 161 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 TRIM65Q6PJ69 517 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 CD300LGQ6UXG3 332 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 COLGALT2Q8IYK4 626 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 FBXL13Q8NEE6 735 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 CPA5Q8WXQ8 436 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 RABGGTAQ92696 567 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 GDF15Q99988 308 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 PAAF1Q9BRP4 392 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 LSM14BQ9BX40 385 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 GANQ9H2C0 597 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 CWH43Q9H720 699 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 NRDE2Q9H7Z3 1164 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 APOBEC3GQ9HC16 384 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 PLCB1Q9NQ66 1216 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 SLC38A7Q9NVC3 462 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 RAB20Q9NX57 234 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 CHD7Q9P2D1 2997 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 DNAJB4Q9UDY4 337 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 AJAP1Q9UKB5 411 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 ITGA11Q9UKX5 1188 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 RANBP2P49792 3224 aaKnown RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 MYO9BQ13459 2157 aa6.71□□□□□ -1.33
SCFD1-212ENST00000554486 CASTOR2A6NHX0 329 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 F8W810 466 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 PODXLO00592 558 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 SCDO00767 359 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 GJB5O95377 273 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 ASS1P00966 412 aaKnown RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 KRT19P08727 400 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 BPIP17213 487 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 PFKLP17858 780 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 ATICP31939 592 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 RPL9P32969 192 aaKnown RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 SLC11A1P49279 550 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 CLCNKBP51801 687 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 NOP14P78316 857 aaKnown RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 HTRA4P83105 476 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 RNASELQ05823 741 aaKnown RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 LRMPQ12912 555 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 TBX2Q13207 712 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 TRPC3Q13507 836 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 DHCR24Q15392 516 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 UPP1Q16831 310 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 ZNF699Q32M78 642 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 KLHDC7AQ5VTJ3 777 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 FAM109BQ6ICB4 259 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 SPOPLQ6IQ16 392 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 GJB7Q6PEY0 223 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 LHFPL2Q6ZUX7 228 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 HERC6Q8IVU3 1022 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 VSTM4Q8IW00 320 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 ARHGEF19Q8IW93 802 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 TRIM48Q8IWZ4 208 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 CMTR2Q8IYT2 770 aaKnown RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 NLGN4XQ8N0W4 816 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 LRRC52Q8N7C0 313 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 PHOSPHO2Q8TCD6 241 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 RSPH1Q8WYR4 309 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 HPDLQ96IR7 371 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 BOCQ9BWV1 1114 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 TTYH3Q9C0H2 523 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 FAM207AQ9NSI2 230 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-212ENST00000554486 DTLQ9NZJ0 730 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 NUB1Q9Y5A7 615 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 ATP23Q9Y6H3 246 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 SLC4A7Q9Y6M7 1214 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 VWA8A3KMH1 1905 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
SCFD1-212ENST00000554486 NLRC5Q86WI3 1866 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 GRXCR1A8MXD5 290 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 BUB1BO60566 1050 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 ZC3H11AO75152 810 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 GYPCP04921 128 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 ITGB1P05556 798 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 TPM3P06753 285 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 GALTP07902 379 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 LINC00271P0C7V0 271 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms