RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 TLK2Q86UE8 772 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TDRPQ86YL5 185 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 ARRDC4Q8NCT1 418 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 FBXO36Q8NEA4 188 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 BEST2Q8NFU1 509 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 RAB3IL1Q8TBN0 382 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 PIP4K2CQ8TBX8 421 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 CCDC110Q8TBZ0 833 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 PYROXD1Q8WU10 500 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 THTPAQ9BU02 230 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 SNRNP25Q9BV90 132 aaKnown RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 CROTQ9UKG9 612 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 GRID1Q9ULK0 1009 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 PIN4Q9Y237 131 aaKnown RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 RALGAPA2Q2PPJ7 1873 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 SMIM35A0A1B0GVV1 85 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 E7ESA3 106 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 H3BRJ5 948 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 PIRO00625 290 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 C2CD2LO14523 706 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 VILLO15195 856 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 VCLP18206 1134 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 CRABP2P29373 138 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 CHN2P52757 468 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 ARL4CP56559 192 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 ROR1Q01973 937 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 SEPT6Q14141 434 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 KRT81Q14533 505 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 LPIN1Q14693 890 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 SNX17Q15036 470 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 MORN1Q5T089 497 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 UBXN11Q5T124 520 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 RGS9BPQ6ZS82 235 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 OTOAQ7RTW8 1153 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 NUP93Q8N1F7 819 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TTC39CQ8N584 583 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 CCDC33Q8N5R6 958 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 LRRC52Q8N7C0 313 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 IRGQQ8WZA9 623 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 NDEL1Q9GZM8 345 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TRABDQ9H4I3 376 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 FBXO6Q9NRD1 293 aaPredicted RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TBCCD1Q9NVR7 557 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 HBS1LQ9Y450 684 aaKnown RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TRIM17Q9Y577 477 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 ACTL7BQ9Y614 415 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 H7C0C1 242 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 FBP2O00757 339 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 DPYSL4O14531 572 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 AVILO75366 819 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 TRMUO75648 421 aaKnown RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 STAMBPO95630 424 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 SDC4P31431 198 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 ATP5OP48047 213 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 EMP3P54852 163 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 DLG1Q12959 904 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 STILQ15468 1287 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 GRAMD1BQ3KR37 738 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 NADK2Q4G0N4 442 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 PDCD4Q53EL6 469 aaKnown RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 EFHC2Q5JST6 749 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 FAXCQ5TGI0 409 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 LPCAT4Q643R3 524 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 C3orf62Q6ZUJ4 267 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 DENND1AQ8TEH3 1009 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 NDRG1Q92597 394 aaKnown RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 FAM124BQ9H5Z6 455 aaPredicted RBP9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 ARMCX1Q9P291 453 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 HESX1Q9UBX0 185 aa9.28□□□□□ -0.92
AL049839.2-201ENST00000553947 BIRC5O15392 142 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 LCP1P13796 627 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 UQCRBP14927 111 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 RBL1P28749 1068 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 RPA3P35244 121 aaPredicted RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 PPP6R3Q5H9R7 873 aaPredicted RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 MDH1BQ5I0G3 518 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 FBXO47Q5MNV8 452 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 MTBPQ96DY7 904 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 CLPTM1LQ96KA5 538 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 MRPL1Q9BYD6 325 aaKnown RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 CACNG4Q9UBN1 327 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 PPM1HQ9ULR3 514 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 UBQLN1Q9UMX0 589 aaKnown RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 ARHGAP42A6NI28 874 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 KPNA7A9QM74 516 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 XPOTO43592 962 aaKnown RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 MYL3P08590 195 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 COL6A2P12110 1019 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 TKTP29401 623 aaKnown RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 GNL1P36915 607 aaPredicted RBP9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 RXRGP48443 463 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 PSEN2P49810 448 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 RELAQ04206 551 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 MAP2K5Q13163 448 aa9.27□□□□□ -0.93
AL049839.2-201ENST00000553947 TFDP2Q14188 446 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms