RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 ATMINO43313 823 aaPredicted RBP24.03■■□□□ 1.44
NEK9-203ENST00000553945 TIMM44O43615 452 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 LILRB5O75023 590 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 HOXB2P14652 356 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 RPL7AP62424 266 aaKnown RBP24.03■■□□□ 1.44
NEK9-203ENST00000553945 TTC39BQ5VTQ0 682 aaPredicted RBP24.03■■□□□ 1.44
NEK9-203ENST00000553945 STRADAQ7RTN6 431 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 KIAA0907Q7Z7F0 614 aaPredicted RBP24.03■■□□□ 1.44
NEK9-203ENST00000553945 C14orf80Q86SX3 495 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 AHI1Q8N157 1196 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 FAM172AQ8WUF8 416 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 SORCS1Q8WY21 1168 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 IGSF8Q969P0 613 aa24.03■■□□□ 1.44
NEK9-203ENST00000553945 POLMQ9NP87 494 aaPredicted RBP24.03■■□□□ 1.44
NEK9-203ENST00000553945 FRYLO94915 3013 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 LMAN2Q12907 356 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 E2F5Q15329 346 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 FSCBQ5H9T9 825 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 ANO7Q6IWH7 933 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 CCAR2Q8N163 923 aaKnown RBP24.02■■□□□ 1.44
NEK9-203ENST00000553945 OR8K1Q8NGG5 319 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 CENPIQ92674 756 aaPredicted RBP24.02■■□□□ 1.44
NEK9-203ENST00000553945 SEMA4AQ9H3S1 761 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 ARHGAP20Q9P2F6 1191 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 THAP10Q9P2Z0 257 aaPredicted RBP24.02■■□□□ 1.44
NEK9-203ENST00000553945 STON1Q9Y6Q2 735 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 USP34Q70CQ2 3546 aa24.02■■□□□ 1.44
NEK9-203ENST00000553945 WASH3PC4AMC7 463 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 AXIN1O15169 862 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 CCP110O43303 1012 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 ALDH1A2O94788 518 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 ZNF143P52747 638 aaPredicted RBP24.01■■□□□ 1.43
NEK9-203ENST00000553945 SRSF5Q13243 272 aaKnown RBP24.01■■□□□ 1.43
NEK9-203ENST00000553945 MAMLD1Q13495 774 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 MBLAC2Q68D91 279 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 PLEKHA7Q6IQ23 1121 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 ADIPOR2Q86V24 386 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 GAS2L3Q86XJ1 694 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 CYB5D2Q8WUJ1 264 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 ZNF653Q96CK0 615 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 ERLEC1Q96DZ1 483 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 TRIM11Q96F44 468 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 LMLNQ96KR4 655 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 HAPLN3Q96S86 360 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 ISCUQ9H1K1 167 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 KIAA1522Q9P206 1035 aaPredicted RBP24.01■■□□□ 1.43
NEK9-203ENST00000553945 CNOT8Q9UFF9 292 aaKnown RBP24.01■■□□□ 1.43
NEK9-203ENST00000553945 RAD54BQ9Y620 910 aa24.01■■□□□ 1.43
NEK9-203ENST00000553945 MYO18AQ92614 2054 aaKnown RBP24.01■■□□□ 1.43
NEK9-203ENST00000553945 CCDC163A0A0D9SF12 145 aa24■■□□□ 1.43
NEK9-203ENST00000553945 A0A1B0GVM2 712 aa24■■□□□ 1.43
NEK9-203ENST00000553945 TCRBV21S2A2A0A5A6 115 aa24■■□□□ 1.43
NEK9-203ENST00000553945 TCAF2A6NFQ2 919 aa24■■□□□ 1.43
NEK9-203ENST00000553945 NPC1O15118 1278 aa24■■□□□ 1.43
NEK9-203ENST00000553945 POLR2EP19388 210 aaKnown RBP24■■□□□ 1.43
NEK9-203ENST00000553945 HNRNPH3P31942 346 aaKnown RBP24■■□□□ 1.43
NEK9-203ENST00000553945 IRAK1P51617 712 aa24■■□□□ 1.43
NEK9-203ENST00000553945 HDAC4P56524 1084 aa24■■□□□ 1.43
NEK9-203ENST00000553945 ZNF234Q14588 700 aa24■■□□□ 1.43
NEK9-203ENST00000553945 TSR1Q2NL82 804 aaKnown RBP24■■□□□ 1.43
NEK9-203ENST00000553945 ARL13BQ3SXY8 428 aa24■■□□□ 1.43
NEK9-203ENST00000553945 FUT11Q495W5 492 aa24■■□□□ 1.43
NEK9-203ENST00000553945 LRRC31Q6UY01 552 aa24■■□□□ 1.43
NEK9-203ENST00000553945 TMC6Q7Z403 805 aa24■■□□□ 1.43
NEK9-203ENST00000553945 C1orf74Q96LT6 269 aa24■■□□□ 1.43
NEK9-203ENST00000553945 DNAJC7Q99615 494 aa24■■□□□ 1.43
NEK9-203ENST00000553945 GABRG3Q99928 467 aa24■■□□□ 1.43
NEK9-203ENST00000553945 CNPY3Q9BT09 278 aa24■■□□□ 1.43
NEK9-203ENST00000553945 ZNHIT6Q9NWK9 470 aaKnown RBP24■■□□□ 1.43
NEK9-203ENST00000553945 BCCIPQ9P287 314 aaKnown RBP eCLIP24■■□□□ 1.43
NEK9-203ENST00000553945 MYO1AQ9UBC5 1043 aa24■■□□□ 1.43
NEK9-203ENST00000553945 EBF1Q9UH73 591 aa24■■□□□ 1.43
NEK9-203ENST00000553945 WDR87Q6ZQQ6 2873 aa24■■□□□ 1.43
NEK9-203ENST00000553945 A0A087X0T9 212 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 HRO43593 1189 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 ATP5BP06576 529 aaKnown RBP23.99■■□□□ 1.43
NEK9-203ENST00000553945 FAM228BP0C875 321 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 DESP17661 470 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 CNR2P34972 360 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 ADRA1BP35368 520 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 EIF4A3P38919 411 aaKnown RBP23.99■■□□□ 1.43
NEK9-203ENST00000553945 IL12RB1P42701 662 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 FNDC3BQ53EP0 1204 aaKnown RBP23.99■■□□□ 1.43
NEK9-203ENST00000553945 ACBD5Q5T8D3 534 aaPredicted RBP23.99■■□□□ 1.43
NEK9-203ENST00000553945 DRC7Q8IY82 874 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 MDGA1Q8NFP4 955 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 TPSD1Q9BZJ3 242 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 PLA2G4CQ9UP65 541 aa23.99■■□□□ 1.43
NEK9-203ENST00000553945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.98■■□□□ 1.43
NEK9-203ENST00000553945 A0A1W2PQF6 199 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 SRGAP2O75044 1071 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 MFAP3LO75121 409 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 LMNAP02545 664 aaKnown RBP23.98■■□□□ 1.43
NEK9-203ENST00000553945 MYBL1P10243 752 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 CSKP41240 450 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 MRE11P49959 708 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 ADKP55263 362 aaKnown RBP23.98■■□□□ 1.43
NEK9-203ENST00000553945 OGDHQ02218 1023 aa23.98■■□□□ 1.43
NEK9-203ENST00000553945 ZNF177Q13360 481 aaPredicted RBP23.98■■□□□ 1.43
NEK9-203ENST00000553945 C5orf22Q49AR2 442 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms