RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FIGNQ5HY92 759 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 EOGTQ5NDL2 527 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 C10orf76Q5T2E6 689 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 APTXQ7Z2E3 356 aaKnown RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TAC4Q86UU9 113 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 RNF214Q8ND24 703 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 RPLP0P6Q8NHW5 317 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 SLC20A1Q8WUM9 679 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 DDX1Q92499 740 aaKnown RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 AZIN2Q96A70 460 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 IFT43Q96FT9 208 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 BTN2A3PQ96KV6 586 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 PPP1R9BQ96SB3 815 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 C11orf70Q9BRQ4 267 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 SELENOOQ9BVL4 669 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 SLC2A11Q9BYW1 496 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 SEMA4AQ9H3S1 761 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 ZNHIT6Q9NWK9 470 aaKnown RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 PLK2Q9NYY3 685 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 ADAM22Q9P0K1 906 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 IFNKQ9P0W0 207 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 NOCTQ9UK39 431 aaKnown RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 RAB23Q9ULC3 237 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 BZW2Q9Y6E2 419 aaKnown RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 MYO16Q9Y6X6 1858 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TICRRQ7Z2Z1 1910 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 OBSL1O75147 1896 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 PATJQ8NI35 1801 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 LRRC53A6NM62 1247 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 CHURC1-FNTBB4DL54 471 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 F5H5T6 163 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 M0QYT0 321 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 MOCS3O95396 460 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 KLKB1P03952 638 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 PDGFAP04085 211 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 SP9P0CG40 484 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 SDC4P31431 198 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 SLC6A11P48066 632 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 RELBQ01201 579 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 FMO1Q01740 532 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 NHLH1Q02575 133 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 DEUP1Q05D60 604 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 FZD5Q13467 585 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 CLEC16AQ2KHT3 1053 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 ARL13BQ3SXY8 428 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 C2orf27AQ580R0 203 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 ZC3H12AQ5D1E8 599 aaKnown RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 RABGAP1LQ5R372 815 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 ACBD5Q5T8D3 534 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 SYPL2Q5VXT5 272 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 OLFML1Q6UWY5 402 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 LRRC31Q6UY01 552 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 MMS22LQ6ZRQ5 1243 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 Q6ZS52 159 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 CHSY1Q86X52 802 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 XYLT1Q86Y38 959 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 CAMKK1Q8N5S9 505 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 TERB1Q8NA31 727 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 HJURPQ8NCD3 748 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 CPLX3Q8WVH0 158 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 WBP2Q969T9 261 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 SLC2A13Q96QE2 648 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 WDCPQ9H6R7 721 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 ZFAND3Q9H8U3 227 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 ZSCAN32Q9NX65 697 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 LUC7L2Q9Y383 392 aaKnown RBP8.64□□□□□ -1.03
PSEN1-209ENST00000553855 PCDHGA2Q9Y5H1 932 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
PSEN1-209ENST00000553855 ANAPC1Q9H1A4 1944 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 A0A1W2PQJ5 194 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 SHISA7A6NL88 538 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 H0Y626 953 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 NPC1O15118 1278 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 TIMM44O43615 452 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 GREM1O60565 184 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 TBL1XO60907 577 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 KLF8O95600 359 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 PENKP01210 267 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 FYNP06241 537 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 KRT3P12035 628 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 MMP8P22894 467 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 CNR2P34972 360 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 RDXP35241 583 aaKnown RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 OXCT1P55809 520 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 WDR4P57081 412 aaKnown RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 ZBED6P86452 979 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 DAB2P98082 770 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 SATB1Q01826 763 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 CDH18Q13634 790 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 DMC1Q14565 340 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 STARD3Q14849 445 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 EIF4HQ15056 248 aaKnown RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 TAF5Q15542 800 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 SLC25A52Q3SY17 297 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms