RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MAGED2Q9UNF1 606 aaPredicted RBP7.12□□□□□ -1.27
LINC-ROR-201ENST00000553704 FAM72CH0Y354 149 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 H3BRB1 525 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZBTB14O43829 449 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CREB3O43889 395 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 DDNO94850 711 aaPredicted RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SERPINE1P05121 402 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZFXP17010 805 aaPredicted RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CNTFP26441 200 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 RPL34P49207 117 aaKnown RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 NDUFV1P49821 464 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 EPHB1P54762 984 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SOX4Q06945 474 aaPredicted RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 USP4Q13107 963 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FAM72AQ5TYM5 149 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FAM72DQ6L9T8 149 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 C4orf22Q6V702 233 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 HFE2Q6ZVN8 426 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 OSTM1Q86WC4 334 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FAM72BQ86X60 149 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 NT5DC4Q86YG4 428 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZDHHC17Q8IUH5 632 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CCNJLQ8IV13 435 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 WDR75Q8IWA0 830 aaKnown RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 GPC2Q8N158 579 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 TTC39CQ8N584 583 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ANKRD52Q8NB46 1076 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 PPFIBP2Q8ND30 876 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 PPTC7Q8NI37 304 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 AGR3Q8TD06 166 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 MAPK15Q8TD08 544 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 RNF139Q8WU17 664 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FAM149B1Q96BN6 582 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 TUBGCP5Q96RT8 1024 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 AGAP2Q99490 1192 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 OSMRQ99650 979 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ECSITQ9BQ95 431 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 KATNBL1Q9H079 304 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 MAN1C1Q9NR34 630 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SNX15Q9NRS6 342 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 COPG2Q9UBF2 871 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SF3B1O75533 1304 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 COL1A2P08123 1366 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ARHGAP42A6NI28 874 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZCCHC18P0CG32 403 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 GNAT1P11488 350 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 MLNP12872 115 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ITGAXP20702 1163 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ACAT1P24752 427 aaKnown RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 GJA5P36382 358 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FDFT1P37268 417 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ARL4AP40617 200 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 MATKP42679 507 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CCR10P46092 362 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 HIC1Q14526 733 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 TBCCQ15814 346 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 KYAT1Q16773 422 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 LRRC36Q1X8D7 754 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 DCAF6Q58WW2 860 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 TCHHL1Q5QJ38 904 aaPredicted RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SYPL2Q5VXT5 272 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 PDPK2PQ6A1A2 396 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 FRMD7Q6ZUT3 714 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 PIGZQ86VD9 579 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 UNC93AQ86WB7 457 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ERO1BQ86YB8 467 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SPNS2Q8IVW8 549 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SULF1Q8IWU6 871 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 DCLK2Q8N568 766 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 NPWQ8N729 165 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 LRRC52Q8N7C0 313 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZNF781Q8N8C0 355 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CCNYQ8ND76 341 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ADAM32Q8TC27 787 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ACMSDQ8TDX5 336 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZNF669Q96BR6 464 aaPredicted RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 OPTNQ96CV9 577 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CERS2Q96G23 380 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 AGAP3Q96P47 875 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 GCOM2Q9BZD3 368 aaPredicted RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 C1orf21Q9H246 121 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 RNF39Q9H2S5 420 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 ADAMTS10Q9H324 1103 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 EBF3Q9H4W6 596 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 EIF2B3Q9NR50 452 aaKnown RBP7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 PIGVQ9NUD9 493 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 SETD4Q9NVD3 440 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 CACNG4Q9UBN1 327 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 PACSIN3Q9UKS6 424 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
LINC-ROR-201ENST00000553704 TRIP12Q14669 1992 aaPredicted RBP7.1□□□□□ -1.27
LINC-ROR-201ENST00000553704 OPHN1O60890 802 aa7.1□□□□□ -1.27
LINC-ROR-201ENST00000553704 RNASEH1O60930 286 aaKnown RBP7.1□□□□□ -1.27
LINC-ROR-201ENST00000553704 LTFP02788 710 aa7.1□□□□□ -1.27
LINC-ROR-201ENST00000553704 LYNP07948 512 aa7.1□□□□□ -1.27
LINC-ROR-201ENST00000553704 RALBP11234 206 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms