RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PEX26Q7Z412 305 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TTC30AQ86WT1 665 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 C1QL4Q86Z23 238 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 RELL1Q8IUW5 271 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MRPL41Q8IXM3 137 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 RNF168Q8IYW5 571 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 FUKQ8N0W3 1084 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 VPS52Q8N1B4 723 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 NUP93Q8N1F7 819 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 SIX6OS1Q8N1H7 587 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 SLC35F6Q8N357 371 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ARHGAP18Q8N392 663 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 UBL4BQ8N7F7 174 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ZNF461Q8TAF7 563 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MICAL1Q8TDZ2 1067 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 FNIP1Q8TF40 1166 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 RIN2Q8WYP3 895 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 IRGQQ8WZA9 623 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MCRS1Q96EZ8 462 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PBKQ96KB5 322 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 SPATA17Q96L03 361 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 C8orf48Q96LL4 319 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TGS1Q96RS0 853 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 DPH2Q9BQC3 489 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ZSWIM1Q9BR11 485 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 C11orf84Q9BUA3 381 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PACSIN1Q9BY11 444 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TRIT1Q9H3H1 467 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 DPEP3Q9H4B8 488 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CSNK1G1Q9HCP0 422 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CNGB3Q9NQW8 809 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MARCH5Q9NX47 278 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TAS2R14Q9NYV8 317 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 BCCIPQ9P287 314 aaKnown RBP eCLIP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MTRRQ9UBK8 725 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 HMGXB4Q9UGU5 601 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 AFF4Q9UHB7 1163 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ADAM30Q9UKF2 790 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ALG6Q9Y672 507 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 DUSP10Q9Y6W6 482 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CCDC66A2RUB6 948 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 TMEM191CA6NGB0 347 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 C5orf67F2Z3F1 127 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 GOLGA8SH3BPF8 625 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CLDN5O00501 218 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CES2O00748 559 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CAPN9O14815 690 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SPOPO43791 374 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 TBC1D4O60343 1298 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 B4GALT3O60512 393 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 HSF2BPO75031 334 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PALMO75781 387 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 URI1O94763 535 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ABLIM3O94929 683 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 EFEMP2O95967 443 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ZBED1O96006 694 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 F9P00740 461 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ERBB2P04626 1255 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 KRT7P08729 469 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CSH1P0DML2 217 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CSH2P0DML3 217 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RALAP11233 206 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 LCP1P13796 627 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ATF2P15336 505 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PDGFRAP16234 1089 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 GPD1P21695 349 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 IGFBP6P24592 240 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 KLRC2P26717 231 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MAN1A1P33908 653 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CA8P35219 290 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CTNNB1P35222 781 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 GDNFP39905 211 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SSR1P43307 286 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PPP3CCP48454 512 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RGS7P49802 495 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 NDUFV1P49821 464 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 TKTL1P51854 596 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 EPHB4P54760 987 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RNASE9P60153 205 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 YWHAZP63104 245 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MRPS5P82675 430 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PTP4A2Q12974 167 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MTA1Q13330 715 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RAB33AQ14088 237 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SMC1AQ14683 1233 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 VEPH1Q14D04 833 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SHHQ15465 462 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MGAT5BQ3V5L5 792 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PTPN20Q4JDL3 420 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RAB41Q5JT25 222 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RTP2Q5QGT7 225 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 FAM102AQ5T9C2 384 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 C11orf63Q6NUN7 778 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CLEC20AQ6ZU45 233 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CCDC149Q6ZUS6 474 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SYDE1Q6ZW31 735 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 BEND5Q7L4P6 421 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SLC26A9Q7LBE3 791 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 TAS1R1Q7RTX1 841 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SLFN11Q7Z7L1 901 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms