RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TMEM9BQ9NQ34 198 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 TMEM51Q9NW97 253 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 WSB2Q9NYS7 404 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-207ENST00000553290 RRN3Q9NYV6 651 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
ACTN1-207ENST00000553290 MUC22E2RYF6 1773 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-207ENST00000553290 SYNJ2BP-COX16A0A087WUM0 186 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 C4orf47A7E2U8 309 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 F8VZ95 297 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 H0Y626 953 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 LSM8O95777 96 aaKnown RBP13.4□□□□□ -0.26
ACTN1-207ENST00000553290 IGLV3-19P01714 112 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 C7P10643 843 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 GABRB2P47870 512 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 ST8SIA6P61647 398 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 MYL5Q02045 173 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 CCDC183Q5T5S1 534 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 TTC39BQ5VTQ0 682 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-207ENST00000553290 ERICH1Q86X53 443 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 ZNF677Q86XU0 584 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 CFAP52Q8N1V2 620 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 KDM1BQ8NB78 822 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 CADM4Q8NFZ8 388 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 C18orf8Q96DM3 657 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 TOE1Q96GM8 510 aaKnown RBP13.4□□□□□ -0.26
ACTN1-207ENST00000553290 HSPA12BQ96MM6 686 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 PRMT1Q99873 361 aaKnown RBP13.4□□□□□ -0.26
ACTN1-207ENST00000553290 NUP58Q9BVL2 599 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 GANQ9H2C0 597 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 CD93Q9NPY3 652 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 COX16Q9P0S2 106 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-207ENST00000553290 SLC6A14Q9UN76 642 aa13.4□□□□□ -0.26
ACTN1-207ENST00000553290 ATXN2Q99700 1313 aaKnown RBP13.39□□□□□ -0.27
ACTN1-207ENST00000553290 M0QYT0 321 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 CDX4O14627 284 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-207ENST00000553290 CFIP05156 583 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 SERPINF2P08697 491 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 CSKP41240 450 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 MATKP42679 507 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 OXCT1P55809 520 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 NME3Q13232 169 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 SLC12A1Q13621 1099 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 FSCBQ5H9T9 825 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 PITRM1Q5JRX3 1037 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 RABGAP1LQ5R372 815 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
ACTN1-207ENST00000553290 RGL4Q8IZJ4 473 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 GPR174Q9BXC1 333 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 PRSS16Q9NQE7 514 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.39□□□□□ -0.27
ACTN1-207ENST00000553290 SUSD2Q9UGT4 822 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 INTS6Q9UL03 887 aaKnown RBP13.39□□□□□ -0.27
ACTN1-207ENST00000553290 STAP1Q9ULZ2 295 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 SPTBN2O15020 2390 aa13.39□□□□□ -0.27
ACTN1-207ENST00000553290 A0A1B0GVM2 712 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 TCAF2A6NFQ2 919 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 SRPRAP08240 638 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 ADRB1P08588 477 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 GNSP15586 552 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 ENGP17813 658 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 COPB1P53618 953 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 ECT2LQ008S8 904 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 GFPT1Q06210 699 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 PLEKHG6Q3KR16 790 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 MMS22LQ6ZRQ5 1243 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 SND1Q7KZF4 910 aaKnown RBP eCLIP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 XYLT1Q86Y38 959 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 CCAR2Q8N163 923 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 ZNF366Q8N895 744 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 MYO19Q96H55 970 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 NPY6RQ99463 290 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 PCED1AQ9H1Q7 454 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 CAPN10Q9HC96 672 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 FAM207AQ9NSI2 230 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 ERVW-1Q9UQF0 538 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 PAXBP1Q9Y5B6 917 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 CNOT1A5YKK6 2376 aaKnown RBP13.38□□□□□ -0.27
ACTN1-207ENST00000553290 NCOR2Q9Y618 2525 aa13.38□□□□□ -0.27
ACTN1-207ENST00000553290 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 MEI4A8MW99 385 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 GFPT2O94808 682 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 F9P00740 461 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 DNTTP04053 509 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 SYPP08247 313 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 MMEP08473 750 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 SOX5P35711 763 aa13.37□□□□□ -0.27
ACTN1-207ENST00000553290 CXCR3P49682 368 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms