RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 SAMD15Q9P1V8 674 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 MAGED2Q9UNF1 606 aaPredicted RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 WDR27A2RRH5 827 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 NCAM2O15394 837 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 USP12O75317 370 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 FAM155BO75949 473 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 KIAA0754O94854 1291 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 CCL5P13501 91 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 TSHRP16473 764 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 MX2P20592 715 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 RPA3P35244 121 aaPredicted RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 GARSP41250 739 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 HCAR3P49019 387 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 PPIDQ08752 370 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 IFT88Q13099 833 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 RTP2Q5QGT7 225 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 UNC5AQ6ZN44 842 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 MICALCLQ6ZW33 695 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 USP33Q8TEY7 942 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 APBB2Q92870 758 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SEC16BQ96JE7 1060 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 FCRL2Q96LA5 508 aaPredicted RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SIGLEC10Q96LC7 697 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 ELAC2Q9BQ52 826 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 NSRP1Q9H0G5 558 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 FBXO44Q9H4M3 255 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 GMIPQ9P107 970 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 PLXNA3P51805 1871 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 GREB1Q4ZG55 1949 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 IQANK1A0A1B0GTG1 560 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 CXorf49A8MYA2 514 aaPredicted RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 IGLV3-25P01717 112 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 APOEP02649 317 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 MGAT1P26572 445 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 EFEMP1Q12805 493 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 ZBTB17Q13105 803 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SEPT7Q16181 437 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 PARP6Q2NL67 630 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 BRMS1LQ5PSV4 323 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 RNF187Q5TA31 235 aaPredicted RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 TRMT10BQ6PF06 316 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 MON1AQ86VX9 555 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 LRRC6Q86X45 466 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 MIB1Q86YT6 1006 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF784Q8NCA9 323 aaPredicted RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC44A1Q8WWI5 657 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 FBXO32Q969P5 355 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 HDAC11Q96DB2 347 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 LRRC39Q96DD0 335 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 STAMBPL1Q96FJ0 436 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SGSM3Q96HU1 749 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SERPINB11Q96P15 392 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 EBNA1BP2Q99848 306 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 MRPL9Q9BYD2 267 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 CCDC134Q9H6E4 229 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 ARHGEF38Q9NXL2 777 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 SAGE1Q9NXZ1 904 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 FETUBQ9UGM5 382 aa9.33□□□□□ -0.92
RAB3IP-218ENST00000553099 COL4A4P53420 1690 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 MTMR11A4FU01 709 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 C2CD2LO14523 706 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 ZBTB24O43167 697 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 HOXA2O43364 376 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 GALTP07902 379 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 MAGEA3P43357 314 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 IL9RQ01113 521 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 FAAP100Q0VG06 881 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 RSPO2Q6UXX9 243 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 RNF19BQ6ZMZ0 732 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 GSDMBQ8TAX9 411 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 C8orf48Q96LL4 319 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 DHRS4Q9BTZ2 278 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 UBP1Q9NZI7 540 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 MPP6Q9NZW5 540 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 SMG5Q9UPR3 1016 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 SCML2Q9UQR0 700 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 CDY1Q9Y6F8 540 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 NYNRINQ9P2P1 1898 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 OR6C75A6NL08 312 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 UGT1A9O60656 530 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 TBX18O95935 607 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 MT-ND3P03897 115 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 HMBSP08397 361 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 FGFR3P22607 806 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 YWHAQP27348 245 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF135P52742 658 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 WDR4P57081 412 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 GALNT2Q10471 571 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 DUSP4Q13115 394 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 RASA2Q15283 850 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 TRIM60Q495X7 471 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 HHATQ5VTY9 493 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 ARHGAP36Q6ZRI8 547 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 BEND5Q7L4P6 421 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 TAS1R1Q7RTX1 841 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC26A11Q86WA9 606 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
RAB3IP-218ENST00000553099 ATPAF2Q8N5M1 289 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms