RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ADAM23O75077 832 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 DAB1O75553 588 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 GRAP2O75791 330 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 TRIM16O95361 564 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 MBL2P11226 248 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 NCAM1P13591 858 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 RARGP13631 454 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 NAP1L1P55209 391 aaKnown RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 KRT83P78385 493 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 DHCR24Q15392 516 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 DUOXA1Q1HG43 343 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 HSF5Q4G112 596 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 SOWAHCQ53LP3 525 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 C19orf48Q6RUI8 117 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 MON1BQ7L1V2 547 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 RAB44Q7Z6P3 723 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 XYLT1Q86Y38 959 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 MCOLN2Q8IZK6 566 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 HDDC3Q8N4P3 179 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 WDTC1Q8N5D0 677 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 DEFB119Q8N690 84 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 OR2I1PQ8NGU4 316 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 CLEC4CQ8WTT0 213 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 RNF34Q969K3 372 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 PNKPQ96T60 521 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 GTPBP2Q9BX10 602 aaKnown RBP11.83□□□□□ -0.52
TMEM116-218ENST00000552839 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 POPDC2Q9HBU9 364 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 PARVAQ9NVD7 372 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 TAS2R14Q9NYV8 317 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 SLC6A14Q9UN76 642 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 GPSM3Q9Y4H4 160 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 USP3Q9Y6I4 520 aa11.83□□□□□ -0.52
TMEM116-218ENST00000552839 DMXL2Q8TDJ6 3036 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SYNJ2BP-COX16A0A087WUM0 186 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 A0A0A0MRY4 1105 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 TCRBV21S2A2A0A5A6 115 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SCAMP3O14828 347 aaKnown RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 PAPSS1O43252 624 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 OPHN1O60890 802 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 KAT7O95251 611 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 NDUFA10O95299 355 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 APODP05090 189 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 GLI1P08151 1106 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SERPINF2P08697 491 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 KRT3P12035 628 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 CD59P13987 128 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 RDXP35241 583 aaKnown RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 HOXD12P35452 270 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 EIF2DP41214 584 aaKnown RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 DPP6P42658 865 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 MAGEA1P43355 309 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 ATXN3P54252 364 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 EFEMP1Q12805 493 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 EOGTQ5NDL2 527 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 BSPRYQ5W0U4 402 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SND1Q7KZF4 910 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SLC26A9Q7LBE3 791 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 MIB1Q86YT6 1006 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SCML4Q8N228 414 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 PGBD3Q8N328 593 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 MINDY1Q8N5J2 469 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 C3orf20Q8ND61 904 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 NDRG1Q92597 394 aaKnown RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 EDEM1Q92611 657 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 TRIM44Q96DX7 344 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 VCPIP1Q96JH7 1222 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 MCEEQ96PE7 176 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 SYT11Q9BT88 431 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 CAPN10Q9HC96 672 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 ASNSD1Q9NWL6 643 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 CLIC5Q9NZA1 410 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 COX16Q9P0S2 106 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
TMEM116-218ENST00000552839 LSM7Q9UK45 103 aaKnown RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-218ENST00000552839 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 YJEFN3A6XGL0 299 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 EIF3CLB5ME19 914 aaKnown RBP11.81□□□□□ -0.52
TMEM116-218ENST00000552839 E7ENQ6 273 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 IRF1P10914 325 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 PFKLP17858 780 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 RRM1P23921 792 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SDC4P31431 198 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 ATP5C1P36542 298 aaKnown RBP11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SCNN1AP37088 669 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 GABRB2P47870 512 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SULT1E1P49888 294 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 TUBP50607 506 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SLC7A9P82251 487 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 RPL6Q02878 288 aaKnown RBP11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SCAPQ12770 1279 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms