RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 VNN1O95497 513 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 C4BPAP04003 597 aaKnown RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 CLDN10P78369 228 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 EFEMP1Q12805 493 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 ARID5BQ14865 1188 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 MPPE1Q53F39 396 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 MBLAC2Q68D91 279 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 SCARA5Q6ZMJ2 495 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 SLC25A45Q8N413 288 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 HPS3Q969F9 1004 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 VCPIP1Q96JH7 1222 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 SERAC1Q96JX3 654 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 LMLNQ96KR4 655 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 ZNF396Q96N95 335 aaPredicted RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 USP28Q96RU2 1077 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 TRIM4Q9C037 500 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 ABCB8Q9NUT2 735 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 MARCH2Q9P0N8 246 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 RASAL2Q9UJF2 1139 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 GGA2Q9UJY4 613 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 STOML2Q9UJZ1 356 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 FZD4Q9ULV1 537 aa11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 TPX2Q9ULW0 747 aaKnown RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
SUPT16H-202ENST00000552829 A0A1W2PP55 124 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 MID1O15344 667 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 USP12O75317 370 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 ATP5BP06576 529 aaKnown RBP11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 PABPC1P11940 636 aaKnown RBP11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 ADORA2BP29275 332 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 ASIC1P78348 528 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 NCOA4Q13772 614 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 CST6Q15828 149 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 HNRNPA1L2Q32P51 320 aaKnown RBP11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 STXBP4Q6ZWJ1 553 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 IQCHQ86VS3 1027 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 AHI1Q8N157 1196 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 XXYLT1Q8NBI6 393 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 WFDC5Q8TCV5 224 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 JAKMIP2Q96AA8 810 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 PLD4Q96BZ4 506 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 DEPDC7Q96QD5 511 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 TWNKQ96RR1 684 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 THSD1Q9NS62 852 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 IGSF5Q9NSI5 407 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 STARD5Q9NSY2 213 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 FBXO2Q9UK22 296 aaPredicted RBP11.84□□□□□ -0.51
SUPT16H-202ENST00000552829 A0A087X0B3 334 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SLC12A8A0AV02 714 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CLIC2O15247 247 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 PHACTR2O75167 634 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SIN3BO75182 1162 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CSO75390 466 aaKnown RBP11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 GIMD1P0DJR0 217 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CKMT1AP12532 417 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CASP4P49662 377 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CYP2J2P51589 502 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SNRPFP62306 86 aaKnown RBP11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 EHHADHQ08426 723 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 INCA1Q0VD86 236 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SFSWAPQ12872 951 aaKnown RBP11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 OVGP1Q12889 678 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 NFATC3Q12968 1075 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 LINC00303Q3SY05 128 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 C9orf64Q5T6V5 341 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 XKR5Q6UX68 686 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 C12orf56Q8IXR9 622 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 OR4C6Q8NH72 309 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 GANCQ8TET4 914 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 TTC17Q96AE7 1141 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 TMA16Q96EY4 203 aaKnown RBP11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CYFIP2Q96F07 1278 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 PRR11Q96HE9 360 aaPredicted RBP11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 MRGPRX3Q96LB0 322 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SLC46A1Q96NT5 459 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 CLIC6Q96NY7 704 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 ANKMY1Q9P2S6 941 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 TJP2Q9UDY2 1190 aa11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SRPRBQ9Y5M8 271 aaKnown RBP11.83□□□□□ -0.52
SUPT16H-202ENST00000552829 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 LY6G6EA0A0G2JKS1 128 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 A0A1B0GVM2 712 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 CDRT15L2A8MXV6 281 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 EFSO43281 561 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 SUV39H1O43463 412 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms