RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ACO1P21399 889 aaKnown RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 PRPH2P23942 346 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 HNF1BP35680 557 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 CLCN2P51788 898 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 RARSP54136 660 aaKnown RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 NXPH1P58417 271 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 UFM1P61960 85 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 TOB2Q14106 344 aaPredicted RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 SPDYE7PQ495Y7 208 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 RABL3Q5HYI8 236 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 SH2D4BQ5SQS7 431 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 ZNF618Q5T7W0 954 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 NAPEPLDQ6IQ20 393 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 RPUSD3Q6P087 351 aaKnown RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 VWA1Q6PCB0 445 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 KLHL24Q6TFL4 600 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 PTCHD4Q6ZW05 846 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 IKBIPQ70UQ0 350 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 SZRD1Q7Z422 152 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 MON1AQ86VX9 555 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 CIR1Q86X95 450 aaPredicted RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 LNX2Q8N448 690 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 EDAQ92838 391 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 ZMAT2Q96NC0 199 aaKnown RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 WWC2-AS2Q96NR7 200 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 EYA3Q99504 573 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 MPHOSPH8Q99549 860 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 ALDH8A1Q9H2A2 487 aaPredicted RBP4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 DKK3Q9UBP4 350 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 KLQ9UEF7 1012 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 SLCO3A1Q9UIG8 710 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 OSGIN2Q9Y236 505 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 PCDHB2Q9Y5E7 798 aa4.41□□□□□ -1.7
LSM6P2-201ENST00000552208 PTGES3LE9PB15 166 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 TMPRSS11DO60235 418 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 PRAMEF2O60811 474 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ERAL1O75616 437 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 CCNDBP1O95273 360 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ONECUT2O95948 504 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ALDOAP04075 364 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 RPN1P04843 607 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 COX7A2P14406 83 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ZNF37AP17032 561 aaPredicted RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 MATN1P21941 496 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 SFPQP23246 707 aaKnown RBP eCLIP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 DUSP1P28562 367 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 PCSK6P29122 969 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 CTGFP29279 349 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 HIBADHP31937 336 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ABCD1P33897 745 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 CNR2P34972 360 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 PSMB10P40306 273 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ARL1P40616 181 aaPredicted RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 MTNR1AP48039 350 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 GPC5P78333 572 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ZBED6P86452 979 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 E2F1Q01094 437 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 EPS8Q12929 822 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 EIF2B5Q13144 721 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 NAA25Q14CX7 972 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 SLC9B1Q4ZJI4 515 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 RUNDC3AQ59EK9 446 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 KYAT3Q6YP21 454 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 LIMS2Q7Z4I7 341 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 P3H2Q8IVL5 708 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 LAS2Q8IYD9 372 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 CCDC105Q8IYK2 499 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 EXD3Q8N9H8 876 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 B3GALNT2Q8NCR0 500 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 CPEB3Q8NE35 698 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 TNIP2Q8NFZ5 429 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 RFKQ969G6 155 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 FKBP10Q96AY3 582 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 EDC3Q96F86 508 aaKnown RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 FAM89AQ96GI7 184 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 KAZALD1Q96I82 304 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 C5orf34Q96MH7 638 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 MXD3Q9BW11 206 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ERVK-5Q9HDB9 667 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ABHD10Q9NUJ1 306 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ALKBH4Q9NXW9 302 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 MGAT4CQ9UBM8 478 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 ZNF215Q9UL58 517 aaPredicted RBP4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 PCDHGB4Q9UN71 923 aa4.4□□□□□ -1.71
LSM6P2-201ENST00000552208 LIPT2A6NK58 231 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 ZNF213O14771 459 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 LDLRAD4O15165 306 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 TSPAN9O75954 239 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 NR4A1P22736 598 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 DDX6P26196 483 aaKnown RBP eCLIP4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 CXCR5P32302 372 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 DIO1P49895 249 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 TERF1P54274 439 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 ARHGAP8P85298 464 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 CHAF1BQ13112 559 aa4.39□□□□□ -1.71
LSM6P2-201ENST00000552208 SF3B3Q15393 1217 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms