RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 ZNF135P52742 658 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ATXN1P54253 815 aaKnown RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 UCP3P55916 312 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ATP8B2P98198 1209 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 NUCB1Q02818 461 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 KRT17Q04695 432 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 MAPK7Q13164 816 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 SLC12A1Q13621 1099 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 PCOLCEQ15113 449 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 RPS6KA2Q15349 733 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 SURF1Q15526 300 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 INSCQ1MX18 579 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 TCTN1Q2MV58 587 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 LRRC24Q50LG9 513 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ARHGAP15Q53QZ3 475 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ZMAT1Q5H9K5 638 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 CACHD1Q5VU97 1274 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ITPRIPL1Q6GPH6 555 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 JMJD6Q6NYC1 403 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 LAYNQ6UX15 382 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 DSTYKQ6XUX3 929 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ZNF572Q7Z3I7 529 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 CLEC14AQ86T13 490 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 HEATR4Q86WZ0 1026 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ANKRD53Q8N9V6 530 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 C8orf58Q8NAV2 365 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 GLIS1Q8NBF1 620 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 PCYOX1LQ8NBM8 494 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 C1orf131Q8NDD1 294 aaKnown RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 DNERQ8NFT8 737 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 SLC30A5Q8TAD4 765 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 GOLGA1Q92805 767 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 GRAMD1AQ96CP6 724 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ZBTB10Q96DT7 871 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 GLT1D1Q96MS3 346 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 C17orf80Q9BSJ5 609 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 MRI1Q9BV20 369 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 IDI2Q9BXS1 227 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 BRD8Q9H0E9 1235 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 MEGF9Q9H1U4 602 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 CHST8Q9H2A9 424 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 SMOC2Q9H3U7 446 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 JMJD4Q9H9V9 463 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 BARX1Q9HBU1 254 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-208ENST00000551691 RGL1Q9NZL6 768 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 ARHGAP26Q9UNA1 814 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 NAV2Q8IVL1 2488 aa4.18□□□□□ -1.74
LIMA1-208ENST00000551691 SCN5AQ14524 2016 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 LOC285556D6RIA3 1793 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 LINC01553A4QN01 128 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 KIF28PB7ZC32 967 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 hCG_1984214I3L0E3 225 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 MUSKO15146 869 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CTAGE5O15320 804 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 RGS10O43665 173 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 PI15O43692 258 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CCNT2O60583 730 aaKnown RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 FZD7O75084 574 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 ACTL6BO94805 426 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CSPG5O95196 566 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CHEK2O96017 543 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 KNG1P01042 644 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 SRGAP2BP0DMP2 458 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 VSIG10L2P0DP72 767 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 ALOX15P16050 662 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 RXRAP19793 462 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 AKT1P31749 480 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 TMPOP42166 694 aaKnown RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 GZMKP49863 264 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 PSMC6P62333 389 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CCNA1P78396 465 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 DEFB103AP81534 67 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 MPP1Q00013 466 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 SIGLEC14Q08ET2 396 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 PRKG2Q13237 762 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 TMEM63BQ5T3F8 832 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 FAXCQ5TGI0 409 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CCDC30Q5VVM6 783 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CRTC1Q6UUV9 634 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 CXCL17Q6UXB2 119 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 MOGAT3Q86VF5 341 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 MICU3Q86XE3 530 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 PDSS2Q86YH6 399 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 LURAP1LQ8IV03 231 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 IL17RDQ8NFM7 739 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 OR10H5Q8NGA6 315 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 OR14K1Q8NGZ2 314 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 ACER1Q8TDN7 264 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 MAML1Q92585 1016 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 PABPC5Q96DU9 382 aaKnown RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 LRRC37BQ96QE4 947 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 NUDT16L1Q9BRJ7 211 aaKnown RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 DPH1Q9BZG8 443 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 FTOQ9C0B1 505 aaKnown RBP eCLIP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 TINAGL1Q9GZM7 467 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-208ENST00000551691 PCDHAC1Q9H158 963 aa4.17□□□□□ -1.74
LIMA1-208ENST00000551691 OR10A2Q9H208 303 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms