RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TUBGCP2Q9BSJ2 902 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 APOL6Q9BWW8 343 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 FAM124BQ9H5Z6 455 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM8AQ9HCN3 771 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 KCND1Q9NSA2 647 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 SAMSN1Q9NSI8 373 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TBC1D13Q9NVG8 400 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 INTS13Q9NVM9 706 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 SFMBT1Q9UHJ3 866 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 COQ6Q9Y2Z9 468 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 COQ4Q9Y3A0 265 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 CEP290O15078 2479 aa6.15□□□□□ -1.43
SCAF11-213ENST00000550629 SCN5AQ14524 2016 aa6.15□□□□□ -1.43
SCAF11-213ENST00000550629 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 ANO9A1A5B4 782 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TBKBP1A7MCY6 615 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 LGALS16A8MUM7 142 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TMEM189-UBE2V1I3L0A0 370 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 ZC3H11AO75152 810 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 PLATP00750 562 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TPM3P06753 285 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TMEM191BP0C7N4 346 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 LAG3P18627 525 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 ATICP31939 592 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 GJA4P35212 333 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 PPM1AP35813 382 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 MTIF2P46199 727 aaKnown RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 FMO5P49326 533 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 MXI1P50539 228 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 SCNN1GP51170 649 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 RBP5P82980 135 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TFAMQ00059 246 aaKnown RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 PPP3CAQ08209 521 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 MYO1EQ12965 1108 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 BTG3Q14201 252 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 KRT31Q15323 416 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 RAB30Q15771 203 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 FILIP1LQ4L180 1135 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 DCAF17Q5H9S7 520 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 MIIPQ5JXC2 388 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 KRT39Q6A163 491 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 DCLRE1AQ6PJP8 1040 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 SARM1Q6SZW1 724 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 APTXQ7Z2E3 356 aaKnown RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TRAPPC11Q7Z392 1133 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 EFCAB13Q8IY85 973 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 COLGALT2Q8IYK4 626 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 KLHL36Q8N4N3 616 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 FBXL13Q8NEE6 735 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 SAMD11Q96NU1 681 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TACO1Q9BSH4 297 aaKnown RBP6.14□□□□□ -1.43
SCAF11-213ENST00000550629 MTMR12Q9C0I1 747 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 DPP3Q9NY33 737 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 DAAM1Q9Y4D1 1078 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 PTPRJQ12913 1337 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 TTC3P53804 2025 aa6.14□□□□□ -1.43
SCAF11-213ENST00000550629 RALGAPA2Q2PPJ7 1873 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 MICAL3Q7RTP6 2002 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ARHGEF37A1IGU5 675 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 PIRO00625 290 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TRAPPC3O43617 180 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 SERPINC1P01008 464 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 POMCP01189 267 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 C4BPAP04003 597 aaKnown RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ALDH2P05091 517 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 FAM163BP0C2L3 166 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM49P0CI25 452 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM49CP0CI26 452 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ATP1A3P13637 1013 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TNFRSF1AP19438 455 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 GCLMP48507 274 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ALDH7A1P49419 539 aaKnown RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 AARSP49588 968 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 COPB1P53618 953 aaKnown RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 SMAD3P84022 425 aaKnown RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ZXDAP98168 799 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 MYL7Q01449 175 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ELAVL2Q12926 359 aaKnown RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 BIRC3Q13489 604 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TRPC3Q13507 836 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 UPP1Q16831 310 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 SGSM1Q2NKQ1 1148 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 LRIT3Q3SXY7 679 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 GLRA4Q5JXX5 417 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 FKBP15Q5T1M5 1219 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 C9orf57Q5W0N0 161 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 GAS2L3Q86XJ1 694 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ZNF280BQ86YH2 543 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 KBTBD2Q8IY47 623 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 GPR65Q8IYL9 337 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TTC39CQ8N584 583 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 CCDC150Q8NCX0 1101 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 OR5B17Q8NGF7 314 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 SPATA18Q8TC71 538 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 JAKMIP2Q96AA8 810 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 C18orf25Q96B23 403 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms