RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 BHLHA9Q7RTU4 235 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 ZC3H3Q8IXZ2 948 aaKnown RBP7.96□□□□□ -1.14
NEK3-201ENST00000550331 SCML4Q8N228 414 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 DDI1Q8WTU0 396 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 SIPA1Q96FS4 1042 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 LRIG1Q96JA1 1093 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 TSG101Q99816 390 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 GPR174Q9BXC1 333 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 ULBP1Q9BZM6 244 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 PCED1AQ9H1Q7 454 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 GOLPH3LQ9H4A5 285 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 STOML2Q9UJZ1 356 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 TSPAN16Q9UKR8 245 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 KIAA1257Q9ULG3 409 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 HBS1LQ9Y450 684 aaKnown RBP7.96□□□□□ -1.14
NEK3-201ENST00000550331 NAV2Q8IVL1 2488 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 METTL12A8MUP2 240 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 KCNJ18B7U540 433 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 BCAT2O15382 392 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 ZNF883P0CG24 379 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ACADMP11310 421 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 TBXAS1P24557 533 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 PRKCHP24723 683 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 MAOBP27338 520 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 HOXD9P28356 352 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 FKBP3Q00688 224 aaKnown RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 ARID5AQ03989 594 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 LRRC63Q05C16 580 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ADIGQ0VDE8 80 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 BST2Q10589 180 aaKnown RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 KCNH2Q12809 1159 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 CAMK2GQ13555 558 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 ARID5BQ14865 1188 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 TRIP6Q15654 476 aaKnown RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 CBWD6Q4V339 395 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 SGO2Q562F6 1265 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 DCAF17Q5H9S7 520 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 CBWD3Q5JTY5 395 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 CBWD5Q5RIA9 395 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ADGRF1Q5T601 910 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ZNF658Q5TYW1 1059 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 DCAF12L1Q5VU92 463 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 TCERG1LQ5VWI1 586 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 BSPRYQ5W0U4 402 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 TMEM215Q68D42 235 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 IL27RAQ6UWB1 636 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 GLRX5Q86SX6 157 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 FMNL3Q8IVF7 1028 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 NAXDQ8IW45 347 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 SMYD4Q8IYR2 804 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 SIX6OS1Q8N1H7 587 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.95□□□□□ -1.14
NEK3-201ENST00000550331 ZNF557Q8N988 423 aaPredicted RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 OR2I1PQ8NGU4 316 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 MDM1Q8TC05 714 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 WFIKKN2Q8TEU8 576 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 RNF139Q8WU17 664 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ADAMTS14Q8WXS8 1223 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 KCTD13Q8WZ19 329 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ERLEC1Q96DZ1 483 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 EEF2KMTQ96G04 330 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 IPO9Q96P70 1041 aaKnown RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 GSDMAQ96QA5 445 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 NUP58Q9BVL2 599 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 GTPBP4Q9BZE4 634 aaKnown RBP7.95□□□□□ -1.14
NEK3-201ENST00000550331 CIPCQ9C0C6 399 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 TMEM245Q9H330 911 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 FBRSQ9HAH7 460 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 LRRC4Q9HBW1 653 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 CNGB3Q9NQW8 809 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 ABCC13Q9NSE7 274 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 HESX1Q9UBX0 185 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 CLEC4EQ9ULY5 219 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 RAXQ9Y2V3 346 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 PCDHB9Q9Y5E1 797 aa7.95□□□□□ -1.14
NEK3-201ENST00000550331 YJEFN3A6XGL0 299 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 E7ENQ6 273 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 TULP2O00295 520 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 O00370 1275 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 SH3BP5O60239 455 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 CBFA2T3O75081 653 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 CER1O95813 267 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 EPHX1P07099 455 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 PAEPP09466 180 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 FTH1P19P0C7X4 201 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 VDRP11473 427 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 CD19P15391 556 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 HLA-FP30511 346 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 PRCPP42785 496 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 ZBTB16Q05516 673 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 MPP7Q5T2T1 576 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 MSANTD2Q6P1R3 559 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 CCNI2Q6ZMN8 369 aaPredicted RBP7.94□□□□□ -1.14
NEK3-201ENST00000550331 KIAA0907Q7Z7F0 614 aaPredicted RBP7.94□□□□□ -1.14
NEK3-201ENST00000550331 FMR1NBQ8N0W7 255 aaPredicted RBP7.94□□□□□ -1.14
NEK3-201ENST00000550331 AHI1Q8N157 1196 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 ZCCHC9Q8N567 271 aaKnown RBP7.94□□□□□ -1.14
NEK3-201ENST00000550331 UBR7Q8N806 425 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 PNPLA1Q8N8W4 532 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms