RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TKFCQ3LXA3 575 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 MGAT5BQ3V5L5 792 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 PTPN20Q4JDL3 420 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 SORT1Q99523 831 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 TDRD3Q9H7E2 651 aaKnown RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 AP4S1Q9Y587 144 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 CHADO15335 359 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 ERVK-10P10266 1014 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 SLC25A11Q02978 314 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 FSTL1Q12841 308 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 LRRC8EQ6NSJ5 796 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 SREK1Q8WXA9 508 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 GMCL1Q96IK5 515 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 PLEKHA8Q96JA3 519 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 MTMR12Q9C0I1 747 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 RSAD1Q9HA92 442 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 DNAJC28Q9NX36 388 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 PSAT1Q9Y617 370 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 RNF103-CHMP3A0A140T963 221 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 MATN2O00339 956 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 SERPINB7O75635 380 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 CHRNGP07510 517 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 TSHRP16473 764 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 ALDH1B1P30837 517 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 PPARGP37231 505 aaPredicted RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 GLRBP48167 497 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 RPL26P61254 145 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 TMEM110Q86TL2 294 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 DEPTORQ8TB45 409 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 CYP26B1Q9NR63 512 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 EMCNQ9ULC0 261 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 RGSL1A5PLK6 1076 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 TRDMT1O14717 391 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 TIPRLO75663 272 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 GRK2P25098 689 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 MAP4P27816 1152 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 L1CAMP32004 1257 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 CA8P35219 290 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 PGGT1BP53609 377 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 SLC10A2Q12908 348 aaPredicted RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 TRIM16LQ309B1 348 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 SWSAP1Q6NVH7 229 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 CCDC80Q76M96 950 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 CHST15Q7LFX5 561 aaPredicted RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 CCNYL1Q8N7R7 359 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 KBTBD7Q8WVZ9 684 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 RSPH1Q8WYR4 309 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 ZNF668Q96K58 619 aaPredicted RBP12.41□□□□□ -0.42
VDR-208ENST00000550325 NLRP4Q96MN2 994 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 SLC29A1Q99808 456 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 HEPHQ9BQS7 1158 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 FAM96AQ9H5X1 160 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 COPG2Q9UBF2 871 aa12.41□□□□□ -0.42
VDR-208ENST00000550325 RPS6KA4O75676 772 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 FUCA1P04066 466 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 ALDOAP04075 364 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 ACAT1P24752 427 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 TCF7P36402 384 aaPredicted RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 BCAP31P51572 246 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 TFDP2Q14188 446 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 KCNT2Q6UVM3 1135 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 TMEM26Q6ZUK4 368 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 ARMCX6Q7L4S7 300 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 MPHOSPH6Q99547 160 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 CAB39LQ9H9S4 337 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.4□□□□□ -0.42
VDR-208ENST00000550325 CLK4Q9HAZ1 481 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 EFR3BQ9Y2G0 817 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 FAM149AA5PLN7 773 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 K7ERI5 159 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 ADAM23O75077 832 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 VAPBO95292 243 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 CSE1LP55060 971 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 ITGA7Q13683 1181 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 FGD3Q5JSP0 725 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 TMEM214Q6NUQ4 689 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 ELMSAN1Q6PJG2 1045 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 SETD3Q86TU7 594 aaPredicted RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 UBA3Q8TBC4 463 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 BORCS5Q969J3 196 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 EBNA1BP2Q99848 306 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 CDH19Q9H159 772 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 CXorf21Q9HAI6 301 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 AGO4Q9HCK5 861 aaKnown RBP12.4□□□□□ -0.42
VDR-208ENST00000550325 PNPLA3Q9NST1 481 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 DCDC2Q9UHG0 476 aa12.4□□□□□ -0.42
VDR-208ENST00000550325 TCP10L2B9ZVM9 353 aa12.4□□□□□ -0.43
VDR-208ENST00000550325 ATE1O95260 518 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms