RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TMEM215Q68D42 235 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 LRRC31Q6UY01 552 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 ANKS1BQ7Z6G8 1248 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 KIAA0907Q7Z7F0 614 aaPredicted RBP23.25■■□□□ 1.31
BRF1-216ENST00000550208 SLFN11Q7Z7L1 901 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 TMTC1Q8IUR5 882 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 CCAR2Q8N163 923 aaKnown RBP23.25■■□□□ 1.31
BRF1-216ENST00000550208 CTNNBL1Q8WYA6 563 aaPredicted RBP23.25■■□□□ 1.31
BRF1-216ENST00000550208 NTAN1Q96AB6 310 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 OSBPL2Q9H1P3 480 aa23.25■■□□□ 1.31
BRF1-216ENST00000550208 E9PAM4 449 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 FAM72CH0Y354 149 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 RNF8O76064 485 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 KLF8O95600 359 aaPredicted RBP23.24■■□□□ 1.31
BRF1-216ENST00000550208 HOXC13P31276 330 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 LMAN2Q12907 356 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 ANGPT1Q15389 498 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 ALFQ53S48 1182 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 ACBD5Q5T8D3 534 aaPredicted RBP23.24■■□□□ 1.31
BRF1-216ENST00000550208 FAM72AQ5TYM5 149 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 FAM72DQ6L9T8 149 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 FAM72BQ86X60 149 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 CCDC117Q8IWD4 279 aaPredicted RBP23.24■■□□□ 1.31
BRF1-216ENST00000550208 CCDC170Q8IYT3 715 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 ALLCQ8N6M5 410 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.24■■□□□ 1.31
BRF1-216ENST00000550208 IL17RCQ8NAC3 791 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 CTTNBP2NLQ9P2B4 639 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 OR12D3Q9UGF7 316 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 PCSK1NQ9UHG2 260 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 ANAPC7Q9UJX3 599 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 GGA2Q9UJY4 613 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 FZD10Q9ULW2 581 aa23.24■■□□□ 1.31
BRF1-216ENST00000550208 MYO18AQ92614 2054 aaKnown RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 GOLGA6L3A6NEY3 463 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 SOWAHDA6NJG2 315 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 PABPC1P11940 636 aaKnown RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 COL9A1P20849 921 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 MAGEA1P43355 309 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 CCR3P51677 355 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 CDH18Q13634 790 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 TTC39BQ5VTQ0 682 aaPredicted RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 DAB2IPQ5VWQ8 1189 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 EGFLAMQ63HQ2 1017 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 TSSK4Q6SA08 328 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 CHST9Q7L1S5 443 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 ADIPOR2Q86V24 386 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 PYROXD2Q8N2H3 581 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 TXNDC5Q8NBS9 432 aaKnown RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 ZNF564Q8TBZ8 553 aaPredicted RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 KCNV2Q8TDN2 545 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 SORCS1Q8WY21 1168 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 ACOX2Q99424 681 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 PRRX2Q99811 253 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 ELOVL2Q9NXB9 296 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 MPP6Q9NZW5 540 aa23.23■■□□□ 1.31
BRF1-216ENST00000550208 KIAA1522Q9P206 1035 aaPredicted RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 EPN1Q9Y6I3 576 aaPredicted RBP23.23■■□□□ 1.31
BRF1-216ENST00000550208 IGLV3-10A0A075B6K4 115 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 A0A1B0GVM2 712 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 TCAF2A6NFQ2 919 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 LCA5LO95447 670 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 MIPP30301 263 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 CSTF1Q05048 431 aaKnown RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 SCAPQ12770 1279 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 TCF15Q12870 199 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 ZNF177Q13360 481 aaPredicted RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 PIGHQ14442 188 aaPredicted RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 ZNF513Q8N8E2 541 aaPredicted RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 ZNF557Q8N988 423 aaPredicted RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 WFIKKN2Q8TEU8 576 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 PEBP4Q96S96 227 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 UVRAGQ9P2Y5 699 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 IP6K2Q9UHH9 426 aa23.22■■□□□ 1.31
BRF1-216ENST00000550208 INTS6Q9UL03 887 aaKnown RBP23.22■■□□□ 1.31
BRF1-216ENST00000550208 H0Y858 1186 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 SGK1O00141 431 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 MYO1FO00160 1098 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 TIMM44O43615 452 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 LRCH4O75427 683 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 CLDN11O75508 207 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 CYLC1P35663 651 aaPredicted RBP23.21■■□□□ 1.31
BRF1-216ENST00000550208 WASP42768 502 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 CDH4P55283 916 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 NRG1Q02297 640 aaPredicted RBP23.21■■□□□ 1.31
BRF1-216ENST00000550208 ACAP1Q15027 740 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 EFHC2Q5JST6 749 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 MBLAC2Q68D91 279 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 RAD9BQ6WBX8 426 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 SLC35G2Q8TBE7 412 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 BAG1Q99933 345 aaPredicted RBP23.21■■□□□ 1.31
BRF1-216ENST00000550208 CIPCQ9C0C6 399 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 KCNH6Q9H252 994 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 OSGEPQ9NPF4 335 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 PRMT8Q9NR22 394 aaPredicted RBP23.21■■□□□ 1.31
BRF1-216ENST00000550208 GPATCH2LQ9NWQ4 482 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 HCN4Q9Y3Q4 1203 aa23.21■■□□□ 1.31
BRF1-216ENST00000550208 PCDHA13Q9Y5I0 950 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms