RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 FAM26DQ5JW98 314 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 OTUD1Q5VV17 481 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SYPL2Q5VXT5 272 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 FAM91A1Q658Y4 838 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 OVOS1Q6IE37 1185 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 TIGD7Q6NT04 549 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 FAM171BQ6P995 826 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 PACS1Q6VY07 963 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 RASSF3Q86WH2 238 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SPATA2LQ8IUW3 424 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 WDR75Q8IWA0 830 aaKnown RBP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 DCP1BQ8IZD4 617 aaKnown RBP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 ZNF567Q8N184 647 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 PYROXD2Q8N2H3 581 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 STKLD1Q8NE28 680 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 URGCPQ8TCY9 931 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 PPP4R1Q8TF05 950 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SH3TC2Q8TF17 1288 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 KAT6AQ92794 2004 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 MYLPFQ96A32 169 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 TSNARE1Q96NA8 513 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 HAPLN3Q96S86 360 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 IL22Q9GZX6 179 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 GBA3Q9H227 469 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SLCO1B3Q9NPD5 702 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 XPNPEP3Q9NQH7 507 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.18□□□□□ -0.94
TMEM116-209ENST00000550020 COX16Q9P0S2 106 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 SIRPGQ9P1W8 387 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 KANSL3Q9P2N6 904 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 CHKBQ9Y259 395 aa9.18□□□□□ -0.94
TMEM116-209ENST00000550020 A0A0G2JND7 137 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 FAM237BA0A1B0GVD1 139 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 MYBPHLA2RUH7 354 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CASTOR2A6NHX0 329 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 NRP1O14786 923 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 INPPL1O15357 1258 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 NEBLO76041 1014 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 BEST1O76090 585 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 USP1O94782 785 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 MAP3K6O95382 1288 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 EOMESO95936 686 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 BPGMP07738 259 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CTSHP09668 335 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 USP17L7P0C7H9 530 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CSH1P0DML2 217 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CSH2P0DML3 217 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 BGNP21810 368 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CALB2P22676 271 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CCNCP24863 283 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 MGAT1P26572 445 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 PSMB4P28070 264 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 EPHB2P29323 1055 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CCR1P32246 355 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 TM4SF4P48230 202 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 POLD2P49005 469 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 NDUFV1P49821 464 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SERPINB8P50452 374 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 PRKAA2P54646 552 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CSE1LP55060 971 aaKnown RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SESN2P58004 480 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 NIPAL4Q0D2K0 466 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 WASHC5Q12768 1159 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 STX3Q13277 289 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CRHR2Q13324 411 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 MTM1Q13496 603 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 UGP2Q16851 508 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 ANO4Q32M45 955 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 TIGD5Q53EQ6 642 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 WASHC2DQ5SRD0 308 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SYCP2LQ5T4T6 812 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 MROH9Q5TGP6 573 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 BSPRYQ5W0U4 402 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 BTBD8Q5XKL5 378 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 GLB1LQ6UWU2 654 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 AGMOQ6ZNB7 445 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CLNKQ7Z7G1 428 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SAPCD2Q86UD0 394 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CCDC117Q8IWD4 279 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 REM2Q8IYK8 340 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 ZNF276Q8N554 614 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 DNAAF3Q8N9W5 541 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 GSTCDQ8NEC7 633 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CERS2Q96G23 380 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 NSL1Q96IY1 281 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SUSD3Q96L08 255 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 TSGA13Q96PP4 275 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 TMEM120AQ9BXJ8 343 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 SLC13A1Q9BZW2 595 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 TKTL2Q9H0I9 626 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 WDR6Q9NNW5 1121 aaKnown RBP9.17□□□□□ -0.94
TMEM116-209ENST00000550020 CASS4Q9NQ75 786 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 RNF19AQ9NV58 838 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 PCMTD2Q9NV79 361 aa9.17□□□□□ -0.94
TMEM116-209ENST00000550020 THAP1Q9NVV9 213 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms