RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 GRIK2Q13002 908 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 ARID5BQ14865 1188 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 MAN2A1Q16706 1144 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 ST3GAL2Q16842 350 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 RAP1GAP2Q684P5 730 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 DEFB106AQ8N104 65 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 CARNMT1Q8N4J0 409 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 ZCCHC9Q8N567 271 aaKnown RBP13.91□□□□□ -0.18
GCN1-206ENST00000549815 KDM1BQ8NB78 822 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 PCED1AQ9H1Q7 454 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 C6orf106Q9H6K1 298 aaPredicted RBP13.91□□□□□ -0.18
GCN1-206ENST00000549815 SUN2Q9UH99 717 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 DNAJC12Q9UKB3 198 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 SLCO1B1Q9Y6L6 691 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 NYNRINQ9P2P1 1898 aaKnown RBP13.91□□□□□ -0.18
GCN1-206ENST00000549815 AKAP13Q12802 2813 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 TYW5A2RUC4 315 aaKnown RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 FOXN3O00409 490 aaPredicted RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 KRT37O76014 449 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 APOEP02649 317 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 SPINK2P20155 84 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 CLCN1P35523 988 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 USP8P40818 1118 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 CTSOP43234 321 aaPredicted RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 MTIF2P46199 727 aaKnown RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 FAM193AP78312 1265 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 SLC14A1Q13336 389 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 HNRNPA1L2Q32P51 320 aaKnown RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 DPCR1Q3MIW9 517 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 PITRM1Q5JRX3 1037 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 OLFML1Q6UWY5 402 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 FAM124AQ86V42 546 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 PASD1Q8IV76 773 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 LGI2Q8N0V4 545 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 ZDHHC5Q9C0B5 715 aa13.9□□□□□ -0.18
GCN1-206ENST00000549815 RSPH9Q9H1X1 276 aaPredicted RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.9□□□□□ -0.18
GCN1-206ENST00000549815 EIF2B4Q9UI10 523 aaKnown RBP13.9□□□□□ -0.18
GCN1-206ENST00000549815 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.19
GCN1-206ENST00000549815 SPAARA0A1B0GVQ0 90 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 C10orf142B7Z368 130 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 SIN3BO75182 1162 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 ERBB2P04626 1255 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 SRPRAP08240 638 aaKnown RBP13.89□□□□□ -0.19
GCN1-206ENST00000549815 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
GCN1-206ENST00000549815 ERCC5P28715 1186 aaPredicted RBP13.89□□□□□ -0.19
GCN1-206ENST00000549815 PTK2Q05397 1052 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 KCNMA1Q12791 1236 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 CDH18Q13634 790 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 EFHC1Q5JVL4 640 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 ZNF776Q68DI1 518 aaPredicted RBP13.89□□□□□ -0.19
GCN1-206ENST00000549815 FAM183BPQ6ZVS7 135 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 SLC47A2Q86VL8 602 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 CHSY1Q86X52 802 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 FAM71AQ8IYT1 594 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 APCDD1Q8J025 514 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 ATP6V0D2Q8N8Y2 350 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 ORAI3Q9BRQ5 295 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 BTBD1Q9H0C5 482 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 MIR1-1HGQ9H1L0 117 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 NDST4Q9H3R1 872 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 OSGEPQ9NPF4 335 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 KIAA1522Q9P206 1035 aaPredicted RBP13.89□□□□□ -0.19
GCN1-206ENST00000549815 ERVW-1Q9UQF0 538 aa13.89□□□□□ -0.19
GCN1-206ENST00000549815 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.89□□□□□ -0.19
GCN1-206ENST00000549815 TTC34A8MYJ7 566 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 H0Y626 953 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 BCAT2O15382 392 aaPredicted RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 SH3BP5O60239 455 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 HSF2BPO75031 334 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 GRAP2O75791 330 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 DNTTP04053 509 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 ST8SIA6P61647 398 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 CDK17Q00537 523 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 C9orf64Q5T6V5 341 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 OTUD1Q5VV17 481 aaPredicted RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 CXorf57Q6NSI4 855 aaKnown RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 C11orf57Q6ZUT1 292 aaPredicted RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 ZNF397Q8NF99 534 aaPredicted RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 CAMK1GQ96NX5 476 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 TUBGCP2Q9BSJ2 902 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 SCNM1Q9BWG6 230 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 NAA15Q9BXJ9 866 aaKnown RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
GCN1-206ENST00000549815 FAM204AQ9H8W3 233 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 SGK2Q9HBY8 427 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 SLCO3A1Q9UIG8 710 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 SCML1Q9UN30 329 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 CFAP47Q6ZTR5 3102 aa13.88□□□□□ -0.19
GCN1-206ENST00000549815 TARSL2A2RTX5 802 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms