RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SETD3Q86TU7 594 aaPredicted RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 UBALD2Q8IYN6 164 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ADGRG2Q8IZP9 1017 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 LGI2Q8N0V4 545 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC35F6Q8N357 371 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ARFGAP1Q8N6T3 406 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 DDI1Q8WTU0 396 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 FGF14Q92915 247 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 PEBP4Q96S96 227 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 PRMT1Q99873 361 aaKnown RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 KXD1Q9BQD3 176 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 FAM83CQ9BQN1 747 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SMG9Q9H0W8 520 aaKnown RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 KCNK12Q9HB15 430 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 PCDH18Q9HCL0 1135 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC2A4RGQ9NR83 387 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 HOMER3Q9NSC5 361 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 TMEM248Q9NWD8 314 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 CDH22Q9UJ99 828 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 VANGL2Q9ULK5 521 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SORCS3Q9UPU3 1222 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 XIRP2A4UGR9 3374 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 MYO10Q9HD67 2058 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 C5orf42Q9H799 3197 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 A0A0U1RQJ8 604 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 USP27XA6NNY8 438 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 H0Y626 953 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 KCNK3O14649 394 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 LRIG2O94898 1065 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 LUC7L3O95232 432 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 PENKP01210 267 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 IL9P15248 144 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 MX2P20592 715 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 TGM2P21980 687 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 NR2C2P49116 596 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 PEX5P50542 639 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 NDST2P52849 883 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 GEMIN4P57678 1058 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 YBEYP58557 167 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 ZXDBP98169 803 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 TFF2Q03403 129 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 CDH18Q13634 790 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 RUNX3Q13761 415 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 DPYSL3Q14195 570 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 DMC1Q14565 340 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 DHCR24Q15392 516 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 PARP15Q460N3 678 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 KCNT1Q5JUK3 1230 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 TMCO4Q5TGY1 634 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 FBXL22Q6P050 247 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 SPOCD1Q6ZMY3 1216 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 RFX8Q6ZV50 586 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 CYP4V2Q6ZWL3 525 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 METTL3Q86U44 580 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 RTL3Q8N8U3 475 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 KIF18AQ8NI77 898 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 WFIKKN2Q8TEU8 576 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 ATRIPQ8WXE1 791 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 HAUS1Q96CS2 278 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 FAF2Q96CS3 445 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 SHDQ96IW2 340 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 CSPG4P5Q96PW8 444 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 KCTD15Q96SI1 283 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 BBS2Q9BXC9 721 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 BRD8Q9H0E9 1235 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 ECT2Q9H8V3 914 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 KIAA1522Q9P206 1035 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 LIMD1Q9UGP4 676 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 SNX12Q9UMY4 172 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 WNT6Q9Y6F9 365 aa10.06□□□□□ -0.8
SMARCD1-206ENST00000549274 GOLGA6L10A0A0M3HER8 536 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ILVBLA1L0T0 632 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ZSCAN5CA6NGD5 496 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ESPNB1AK53 854 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 GFRA2O00451 464 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 APOL1O14791 398 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 DDX3YO15523 660 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ZNF500O60304 480 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 CACNG3O60359 315 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TBL1XO60907 577 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TYRP14679 529 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 OR1E1P30953 314 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 PAFAH1B1P43034 410 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ARSEP51690 589 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 SULT2A1Q06520 285 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ZNF33AQ06730 810 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 EIF4HQ15056 248 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TAZQ16635 292 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 ANO4Q32M45 955 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 LY6G5CQ5SRR4 150 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms