RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 DDX43Q9NXZ2 648 aaKnown RBP6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 HESX1Q9UBX0 185 aa6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 IP6K2Q9UHH9 426 aa6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 CDH9Q9ULB4 789 aa6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 SF3B6Q9Y3B4 125 aaKnown RBP6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 PCDHB7Q9Y5E2 793 aa6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 V9GYY5 206 aaPredicted RBP6.9□□□□□ -1.3
TGFBR1-206ENST00000549021 COL4A4P53420 1690 aaPredicted RBP6.9□□□□□ -1.31
TGFBR1-206ENST00000549021 DENND4CQ5VZ89 1909 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 MTCL1Q9Y4B5 1905 aaKnown RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 TMEM110-MUSTN1A8MSY1 372 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 TBX1O43435 398 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 SPOPO43791 374 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 HYAL3O43820 417 aaPredicted RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CEP104O60308 925 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 B4GALT3O60512 393 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 B3GAT3O94766 335 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ERBB2P04626 1255 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CLTBP09497 229 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 KRT3P12035 628 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CCDC130P13994 396 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 TYMPP19971 482 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 SPINK2P20155 84 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 GRIA2P42262 883 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 BRCC3P46736 316 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 BCAT1P54687 386 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CCL23P55773 120 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 SNX16P57768 344 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 PIGHQ14442 188 aaPredicted RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ACAP1Q15027 740 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ELF2Q15723 593 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CLUL1Q15846 466 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 TEX35Q5T0J7 233 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CYP4A22Q5TCH4 519 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 DCAF12L1Q5VU92 463 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 PMF1Q6P1K2 205 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CNKSR3Q6P9H4 555 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 DCUN1D2Q6PH85 259 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 PAQR9Q6ZVX9 377 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ZNF765Q7L2R6 523 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 METTL23Q86XA0 190 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CPNE8Q86YQ8 564 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ZDHHC17Q8IUH5 632 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 FUKQ8N0W3 1084 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 FBXL6Q8N531 539 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 NIPA2Q8N8Q9 360 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 NOA1Q8NC60 698 aaKnown RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 SLC2A14Q8TDB8 520 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 IPO4Q8TEX9 1081 aaKnown RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 FNIP1Q8TF40 1166 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 BTN2A2Q8WVV5 523 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ANKRD7Q92527 254 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ALG3Q92685 438 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 PAWRQ96IZ0 340 aaKnown RBP6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 MRGPRX3Q96LB0 322 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 HSFY1Q96LI6 401 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 MCEEQ96PE7 176 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 RTP3Q9BQQ7 232 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ACBD6Q9BR61 282 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 DUSP16Q9BY84 665 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 PRDM14Q9GZV8 571 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 SYNCQ9H7C4 482 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 NRDE2Q9H7Z3 1164 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 CRTAC1Q9NQ79 661 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 FAM49BQ9NUQ9 324 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 GFOD1Q9NXC2 390 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 EHD2Q9NZN4 543 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 SFMBT1Q9UHJ3 866 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 TMEM59LQ9UK28 342 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 DSEQ9UL01 958 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ATP11BQ9Y2G3 1177 aa6.89□□□□□ -1.31
TGFBR1-206ENST00000549021 ANAPC1Q9H1A4 1944 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 PLXNA4Q9HCM2 1894 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 E5RJQ4 531 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 GOLGA8SH3BPF8 625 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 CCDC188H7C350 402 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 PGRMC1O00264 195 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 TULP2O00295 520 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 XPO1O14980 1071 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 KIAA0355O15063 1070 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 PSTPIP1O43586 416 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 TRAPPC3O43617 180 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 ATP2C2O75185 946 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 TIMP1P01033 207 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 ITGB1P05556 798 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 HSPA1AP0DMV8 641 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 HSPA1BP0DMV9 641 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 PYGMP11217 842 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 ACAT1P24752 427 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 PCSK1P29120 753 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 ADORA2BP29275 332 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 TKTP29401 623 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 RFC1P35251 1148 aaPredicted RBP6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 ACADSBP45954 432 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 MARCKSL1P49006 195 aa6.88□□□□□ -1.31
TGFBR1-206ENST00000549021 DNA2P51530 1060 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms