RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SLC12A1Q13621 1099 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 PUM1Q14671 1186 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 LARS2Q15031 903 aaKnown RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ANKRD1Q15327 319 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3GQ6DHY5 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3CQ6IPX1 549 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TMEM88Q6PEY1 159 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 NAPRTQ6XQN6 538 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TRIM72Q6ZMU5 477 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 SLC29A4Q7RTT9 530 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 TBC1D3Q8IZP1 549 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 PAF1Q8N7H5 531 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 EXD3Q8N9H8 876 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 FSIP1Q8NA03 581 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 AKAP1Q92667 903 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 HTRA1Q92743 480 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 P2RY11Q96G91 374 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ZNF845Q96IR2 970 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 MPP4Q96JB8 637 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 SYNPO2LQ9H987 977 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 UBN1Q9NPG3 1134 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 IFT80Q9P2H3 777 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 BAG5Q9UL15 447 aa4.58□□□□□ -1.68
PTCH1-216ENST00000548379 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
PTCH1-216ENST00000548379 ABCA9Q8IUA7 1624 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ATP10AO60312 1499 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 NUP153P49790 1475 aaKnown RBP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 PLCH2O75038 1416 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 EEA1Q15075 1411 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 C16orf96A6NNT2 1141 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 TSPAN3O60637 253 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 JTBO76095 146 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 RHOBTB3O94955 611 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 HNRNPCP07910 306 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 PEPDP12955 493 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 CXCR5P32302 372 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 PNPLA4P41247 253 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 STAT6P42226 847 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 AGTR2P50052 363 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 TUBP50607 506 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 COL10A1Q03692 680 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 TRPC3Q13507 836 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 MFSD13AQ14CX5 517 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 RALBP1Q15311 655 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ERCC6LQ2NKX8 1250 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 FAM153CQ494X1 144 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 LRRC24Q50LG9 513 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ANO7Q6IWH7 933 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 RETSATQ6NUM9 610 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 KIAA1324Q6UXG2 1013 aaKnown RBP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 SLC39A5Q6ZMH5 540 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ESX1Q8N693 406 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ARRDC3Q96B67 414 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 SARAFQ96BY9 339 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 DAZAP1Q96EP5 407 aaKnown RBP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 HIC2Q96JB3 615 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ADGRE3Q9BY15 652 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 RMI1Q9H9A7 625 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 SERGEFQ9UGK8 458 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 VPS4AQ9UN37 437 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 B3GNT3Q9Y2A9 372 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 HS3ST3A1Q9Y663 406 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 SIRT4Q9Y6E7 314 aaPredicted RBP4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ADAMTSL3P82987 1691 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 MADDQ8WXG6 1647 aa4.57□□□□□ -1.68
PTCH1-216ENST00000548379 ARHGEF40Q8TER5 1519 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 CLIP1P30622 1438 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 SPATA31A5Q5VU36 1347 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 SPATA31A6Q5VVP1 1343 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 SPATA31A7Q8IWB4 1347 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 TARM1B6A8C7 271 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 GRM8O00222 908 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 CLIC1O00299 241 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 EXOC3O60645 756 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 C1QL1O75973 258 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 ALDOAP04075 364 aaKnown RBP4.56□□□□□ -1.68
PTCH1-216ENST00000548379 SLC8A1P32418 973 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 LIFRP42702 1097 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 PCP4P48539 62 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 SLC37A1P57057 533 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 MPP1Q00013 466 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 RNASELQ05823 741 aaKnown RBP4.56□□□□□ -1.68
PTCH1-216ENST00000548379 DMWDQ09019 674 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 THOC5Q13769 683 aaKnown RBP4.56□□□□□ -1.68
PTCH1-216ENST00000548379 DLGAP5Q15398 846 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 CNGA3Q16281 694 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 WDR45BQ5MNZ6 344 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 CBWD5Q5RIA9 395 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 TSTD2Q5T7W7 516 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 ATG16L1Q676U5 607 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 DCDC5Q6ZRR9 648 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 MRGPRGQ86SM5 289 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 GGNQ86UU5 652 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 ADGRF3Q8IZF5 1079 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 AFAP1Q8N556 730 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 LINS1Q8NG48 757 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 CAGE1Q8TC20 777 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 ADAMTS18Q8TE60 1221 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms