RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 C5orf60A6NFR6 353 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 F5H5T6 163 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 MAP2K7O14733 419 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 ACSL4O60488 711 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 PPFIA2O75334 1257 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 GCATO75600 419 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 POU2F2P09086 479 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 FAM153BP0C7A2 387 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 DDX6P26196 483 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 GABRR2P28476 465 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 RPL22P35268 128 aaKnown RBP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 GDF10P55107 478 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 GALNT2Q10471 571 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 AP1B1Q10567 949 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 AUHQ13825 339 aaKnown RBP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 FAM153CQ494X1 144 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 RABGAP1LQ5R372 815 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 CFAP58Q5T655 872 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 ALS2CLQ60I27 953 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 HIBCHQ6NVY1 386 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 RHBDF2Q6PJF5 856 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 PPP1R21Q6ZMI0 780 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 CCNYQ8ND76 341 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 HDAC11Q96DB2 347 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 RUFY1Q96T51 708 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 PHACTR1Q9C0D0 580 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-204ENST00000548068 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 FAM153AQ9UHL3 310 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 NEU3Q9UQ49 428 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 SNX10Q9Y5X0 201 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 SOBPA7XYQ1 873 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 OPHN1O60890 802 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 CLASP2O75122 1294 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ZSCAN5DPP0CG00 497 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ETS1P14921 441 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 TACR2P21452 398 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 FDFT1P37268 417 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 GGCXP38435 758 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 MAPKAPK2P49137 400 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 NDST2P52849 883 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 DHX9Q08211 1270 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 PPIDQ08752 370 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ARHGAP15Q53QZ3 475 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 RNASEH2BQ5TBB1 312 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 TTC39BQ5VTQ0 682 aaPredicted RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 RAP1GAP2Q684P5 730 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 FAM109BQ6ICB4 259 aaPredicted RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 TMEM150AQ86TG1 271 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 TMC8Q8IU68 726 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ZCCHC9Q8N567 271 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 GDAP1L1Q96MZ0 367 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 VAT1Q99536 393 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 PRMT1Q99873 361 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 PRDM12Q9H4Q4 367 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 TMEM248Q9NWD8 314 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ZDHHC7Q9NXF8 308 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 XPO7Q9UIA9 1087 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 ZMYM5Q9UJ78 669 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
RAB5B-204ENST00000548068 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
RAB5B-204ENST00000548068 A0A0A0MRY4 1105 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 TRAV19A0A0A6YYK7 116 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 C2orf78A6NCI8 922 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 GOLGA6BA6NDN3 693 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 DRGXA6NNA5 263 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 RNF103O00237 685 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 CHADO15335 359 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 CCL16O15467 120 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 STC2O76061 302 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 CSPG5O95196 566 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 MAP3K6O95382 1288 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 OLFM2O95897 454 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 PTPN2P17706 415 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 CORO1AP31146 461 aaKnown RBP12.71□□□□□ -0.37
RAB5B-204ENST00000548068 KCNQ1P51787 676 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 PMS2P54278 862 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 EPHA5P54756 1037 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 BASP1P80723 227 aaKnown RBP12.71□□□□□ -0.37
RAB5B-204ENST00000548068 C5orf22Q49AR2 442 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 COL13A1Q5TAT6 717 aaPredicted RBP12.71□□□□□ -0.37
RAB5B-204ENST00000548068 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 ITPRIPL1Q6GPH6 555 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 TIGD7Q6NT04 549 aaPredicted RBP12.71□□□□□ -0.37
RAB5B-204ENST00000548068 TRMT10CQ7L0Y3 403 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms