RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 C7orf26Q96N11 449 aa13.32□□□□□ -0.28
BRF1-210ENST00000547374 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
BRF1-210ENST00000547374 S100A14Q9HCY8 104 aa13.32□□□□□ -0.28
BRF1-210ENST00000547374 SSU72Q9NP77 194 aaKnown RBP13.32□□□□□ -0.28
BRF1-210ENST00000547374 SNX15Q9NRS6 342 aa13.32□□□□□ -0.28
BRF1-210ENST00000547374 PCDHA11Q9Y5I1 949 aa13.32□□□□□ -0.28
BRF1-210ENST00000547374 PLIN3O60664 434 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 SEC24DO94855 1032 aaPredicted RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 KLHL2O95198 593 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 SLC4A1P02730 911 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 SERPINE1P05121 402 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CACNB2Q08289 660 aaPredicted RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 ITKQ08881 620 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 POU6F1Q14863 301 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CYP2R1Q6VVX0 501 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CHRAC1Q9NRG0 131 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 EFR3BQ9Y2G0 817 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 DFFAO00273 331 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 HBP1O60381 514 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 JCHAINP01591 159 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CRHR1P34998 444 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 SERPINB9P50453 376 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 PCSK7Q16549 785 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 OR52E8Q6IFG1 317 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 UBR7Q8N806 425 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 DNERQ8NFT8 737 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 PRPF18Q99633 342 aaKnown RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 TXNRD2Q9NNW7 524 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 PIN4Q9Y237 131 aaKnown RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 POMPQ9Y244 141 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 A0A088AWK7 358 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 EEF2KO00418 725 aaKnown RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 FAM189A1O60320 539 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 MOCS2O96007 188 aaPredicted RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 ARSAP15289 507 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 RXRBP28702 533 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 ABCE1P61221 599 aaKnown RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 TMEM174Q8WUU8 243 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
BRF1-210ENST00000547374 PDZD7Q9H5P4 517 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 CNTN3Q9P232 1028 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 PGAP2Q9UHJ9 254 aa13.31□□□□□ -0.28
BRF1-210ENST00000547374 TRDMT1O14717 391 aaKnown RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 AHCYL1O43865 530 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 PMLP29590 882 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 L1CAMP32004 1257 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 ADCYAP1R1P41586 468 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 CCNG1P51959 295 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 TTLL4Q14679 1199 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 CWF19L1Q69YN2 538 aaKnown RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 ZNF778Q96MU6 729 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 NXF3Q9H4D5 531 aaKnown RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 TLE6Q9H808 572 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 TCF7L2Q9NQB0 619 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.3□□□□□ -0.28
BRF1-210ENST00000547374 SIRPGQ9P1W8 387 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 ARHGAP26Q9UNA1 814 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 TNFSF13BQ9Y275 285 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 TMEM233B4DJY2 109 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 C9JVG2 144 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 CTBP1Q13363 440 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 ACVR1CQ8NER5 493 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 PPP2R3CQ969Q6 453 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 RCN3Q96D15 328 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 CCDC106Q9BWC9 280 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 FRMD8P1Q9BZ68 369 aaPredicted RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 RHBDL2Q9NX52 303 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 PDP2Q9P2J9 529 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 KIAA1217Q5T5P2 1943 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 ATP6AP2A0A1C7CYW4 349 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 PMPCBO75439 489 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 ATP6AP2O75787 350 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 PIGNO95427 931 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 COX4I1P13073 169 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 CDH5P33151 784 aaPredicted RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 ROR2Q01974 943 aaKnown RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 MAPK15Q8TD08 544 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 DIS3LQ8TF46 1054 aaKnown RBP13.3□□□□□ -0.28
BRF1-210ENST00000547374 NPAS2Q99743 824 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 COPG2Q9UBF2 871 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 TRIP11Q15643 1979 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 UBR3Q6ZT12 1888 aa13.3□□□□□ -0.28
BRF1-210ENST00000547374 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
BRF1-210ENST00000547374 MAGEC1O60732 1142 aa13.29□□□□□ -0.28
BRF1-210ENST00000547374 FGF3P11487 239 aaPredicted RBP13.29□□□□□ -0.28
BRF1-210ENST00000547374 NCAM1P13591 858 aa13.29□□□□□ -0.28
BRF1-210ENST00000547374 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms