RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NACA2Q9H009 215 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 DSEQ9UL01 958 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 PCDHB5Q9Y5E4 795 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 LAMA1P25391 3075 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 A0A0U1RQS6 177 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 TCP11X1B4DZS4 312 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
CCDC38-202ENST00000546386 FBXO21O94952 628 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 GJB5O95377 273 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SEC24AO95486 1093 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SYN1P17600 705 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SAT1P21673 171 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SKOR1P84550 965 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 ARL13BQ3SXY8 428 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 AGBL2Q5U5Z8 902 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 PIK3R6Q5UE93 754 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 NPAS4Q8IUM7 802 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 DNAAF3Q8N9W5 541 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
CCDC38-202ENST00000546386 ZNF512Q96ME7 567 aaPredicted RBP12.29□□□□□ -0.44
CCDC38-202ENST00000546386 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SLCO1B3Q9NPD5 702 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 PAK5Q9P286 719 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 HS3ST4Q9Y661 456 aa12.29□□□□□ -0.44
CCDC38-202ENST00000546386 SLC12A8A0AV02 714 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 GOLGA8CPA6NN73 597 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 TRIM66O15016 1216 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 DGKIO75912 1065 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 ERVK-10P10266 1014 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 NFKB1P19838 968 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 MMP13P45452 471 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CXCR3P49682 368 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 LBX1P52954 281 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 ITKQ08881 620 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CCHCR1Q8TD31 782 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 PABPC5Q96DU9 382 aaKnown RBP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 OLFM3Q96PB7 478 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 QKIQ96PU8 341 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 ELAC2Q9BQ52 826 aaKnown RBP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 TTPALQ9BTX7 342 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 FTHL17Q9BXU8 183 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CYP4F11Q9HBI6 524 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 FGFR1OP2Q9NVK5 253 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 SLC17A7Q9P2U7 560 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 OGDHLQ9ULD0 1010 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 PSAT1Q9Y617 370 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 J3KR12 359 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CCL22O00626 93 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 IRAK2O43187 625 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 TSPAN3O60637 253 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CDH16O75309 829 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 PMPCBO75439 489 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CPP00450 1065 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 BMP1P13497 986 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CA4P22748 312 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 PTPN3P26045 913 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 CHRNA4P43681 627 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 IFT88Q13099 833 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 WBP2Q969T9 261 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 SERAC1Q96JX3 654 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 UROC1Q96N76 676 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 SLC39A8Q9C0K1 460 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 EPN3Q9H201 632 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 TRABDQ9H4I3 376 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 KANSL3Q9P2N6 904 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 TEX264Q9Y6I9 313 aa12.28□□□□□ -0.44
CCDC38-202ENST00000546386 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC38-202ENST00000546386 C2orf78A6NCI8 922 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 GMNCA6NCL1 334 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 BUD23O43709 281 aaKnown RBP12.27□□□□□ -0.44
CCDC38-202ENST00000546386 AGTP01019 485 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CSH1P0DML2 217 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CSH2P0DML3 217 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 HAPLN1P10915 354 aaPredicted RBP12.27□□□□□ -0.44
CCDC38-202ENST00000546386 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.44
CCDC38-202ENST00000546386 YWHAQP27348 245 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CCR1P32246 355 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 SLC1A5Q15758 541 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 SPRED3Q2MJR0 410 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 BNIPLQ7Z465 357 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CDKL3Q8IVW4 592 aaPredicted RBP12.27□□□□□ -0.44
CCDC38-202ENST00000546386 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CNTD1Q8N815 330 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 ATXN2LQ8WWM7 1075 aaKnown RBP12.27□□□□□ -0.44
CCDC38-202ENST00000546386 MAML1Q92585 1016 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 IGSF8Q969P0 613 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 MOCOSQ96EN8 888 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 TSPAN18Q96SJ8 248 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 GORASP1Q9BQQ3 440 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CCDC77Q9BR77 488 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 CFHR5Q9BXR6 569 aa12.27□□□□□ -0.44
CCDC38-202ENST00000546386 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms