RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RGS18Q9NS28 235 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 NDUFAF1Q9Y375 327 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 BIRC5O15392 142 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 URODP06132 367 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TAL1P17542 331 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 RBL1P28749 1068 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 CACNA2D1P54289 1103 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 FUKQ8N0W3 1084 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 MIER2Q8N344 545 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 DIS3LQ8TF46 1054 aaKnown RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 WNT8BQ93098 351 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 V9GYQ6 96 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 CHI3L1P36222 383 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 POU6F1Q14863 301 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 BBS12Q6ZW61 710 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 PTAR1Q7Z6K3 402 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 RDH11Q8TC12 318 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 GBA2Q9HCG7 927 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ZC4H2Q9NQZ6 224 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 ABCC13Q9NSE7 274 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 STK39Q9UEW8 545 aa12.79□□□□□ -0.36
COL4A6-209ENST00000545689 SYNDIG1LA6NDD5 238 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 NCF1BA6NI72 391 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 NCF1CA8MVU1 366 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 LTFP02788 710 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 NCF1P14598 390 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ZNF7P17097 686 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ADRA1DP25100 572 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 TUBP50607 506 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 XRCC4Q13426 336 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 PCID2Q5JVF3 399 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 GPC2Q8N158 579 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 PRELID2Q8N945 189 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 FAM120BQ96EK7 910 aaKnown RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ELOVL6Q9H5J4 265 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 EPHB6O15197 1021 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 OCM2P0CE71 109 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 OCMP0CE72 109 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 CYP2A7P20853 494 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 PDK4Q16654 411 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 EXOSC4Q9NPD3 245 aaKnown RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 SNCAIPQ9Y6H5 919 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 SPACA6W5XKT8 324 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 PDHXO00330 501 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 TPST1O60507 370 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 RPA3P35244 121 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 PSEN2P49810 448 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ANKS6Q68DC2 871 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 STK40Q8N2I9 435 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 C2CD2Q9Y426 696 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 RCCD1A6NED2 376 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 LGALS2P05162 132 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 PTPRAP18433 802 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ACBD5Q5T8D3 534 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 UGT2B28Q9BY64 529 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 SLC7A5P2Q9GIP4 190 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 ITM2BQ9Y287 266 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 MRASO14807 208 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 CSE1LP55060 971 aaKnown RBP12.78□□□□□ -0.36
COL4A6-209ENST00000545689 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 DNAJB3Q8WWF6 145 aa12.78□□□□□ -0.36
COL4A6-209ENST00000545689 MGAT4DA6NG13 374 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 UNC5CO95185 931 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 AIF1P55008 147 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 NOMO3P69849 1222 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 ENPEPQ07075 957 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.36
COL4A6-209ENST00000545689 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 ZFPM1Q8IX07 1006 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 NSMCE2Q96MF7 247 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 C9orf16Q9BUW7 83 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 hCG_1818297A0A087WSY0 165 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 ALDH2P05091 517 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 AKR1A1P14550 325 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 DDR1Q08345 913 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 TRIM16LQ309B1 348 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 ARMC6Q6NXE6 501 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 IYDQ6PHW0 289 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 TTC30BQ8N4P2 665 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.36
COL4A6-209ENST00000545689 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.36
COL4A6-209ENST00000545689 TMEM79Q9BSE2 394 aa12.77□□□□□ -0.36
COL4A6-209ENST00000545689 DPY30Q9C005 99 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms