RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CASC4Q6P4E1 433 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 FBXL19Q6PCT2 694 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 TMC7Q7Z402 723 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 RSPH3Q86UC2 560 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 KHSRPQ92945 711 aaKnown RBP eCLIP8.98□□□□□ -0.975e-6■■□□□ 14.1
TDP1-204ENST00000545686 CLMNQ96JQ2 1002 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 PRICKLE1Q96MT3 831 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 FERMT1Q9BQL6 677 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 PDZD7Q9H5P4 517 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 DTLQ9NZJ0 730 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 TMEM216Q9P0N5 145 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 MID2Q9UJV3 735 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 AP4E1Q9UPM8 1137 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 INPP5FQ9Y2H2 1132 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 TANC1Q9C0D5 1861 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 DCXO43602 365 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 STRNO43815 780 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 THRAP10827 490 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 GLDCP23378 1020 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 RPS12P25398 132 aaKnown RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 TYK2P29597 1187 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 RBP5P82980 135 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 CREB5Q02930 508 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 TMEM132DQ14C87 1099 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 TMEM259Q4ZIN3 620 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SH2D4BQ5SQS7 431 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 NCBP2-AS2Q69YL0 99 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 LCA5Q86VQ0 697 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 AHI1Q8N157 1196 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PHTF2Q8N3S3 785 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 ARNTL2Q8WYA1 636 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 DLG3Q92796 817 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 DCUN1D1Q96GG9 259 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 CSPG4P5Q96PW8 444 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 MRPS26Q9BYN8 205 aaKnown RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 DHX35Q9H5Z1 703 aaKnown RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 ZNF696Q9H7X3 374 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SNX15Q9NRS6 342 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 MTMR10Q9NXD2 777 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SCAF8Q9UPN6 1271 aaKnown RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 TSC2P49815 1807 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SBF1O95248 1867 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 A0A1B0GVG6 124 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PIK3R2O00459 728 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 TXNDC9O14530 226 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 CAPN15O75808 1086 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 TNFAIP8O95379 198 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 HSPA4LO95757 839 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 MPOP05164 745 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 APOA4P06727 396 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 POLBP06746 335 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 CYP2C8P10632 490 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 MGAT1P26572 445 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PHKA2P46019 1235 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 RGS7P49802 495 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PRKAA2P54646 552 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 USP41Q3LFD5 358 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 NBPF12Q5TAG4 269 aaPredicted RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 PMF1Q6P1K2 205 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 ATG14Q6ZNE5 492 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 DPH6Q7L8W6 267 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SLC26A9Q7LBE3 791 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SATL1Q86VE3 508 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 IFNLR1Q8IU57 520 aaPredicted RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 PSTKQ8IV42 348 aaKnown RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 UNC5BQ8IZJ1 945 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 ADCY4Q8NFM4 1077 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SLC7A14Q8TBB6 771 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 SLC35F5Q8WV83 523 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 CERS2Q96G23 380 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 HIC2Q96JB3 615 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 WRNIP1Q96S55 665 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 KCTD15Q96SI1 283 aaPredicted RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 GPR20Q99678 358 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 RBBP8Q99708 897 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
TDP1-204ENST00000545686 COG4Q9H9E3 785 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PADI4Q9UM07 663 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PSAT1Q9Y617 370 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
TDP1-204ENST00000545686 PAPSS1O43252 624 aaPredicted RBP8.96□□□□□ -0.97
TDP1-204ENST00000545686 ZBTB14O43829 449 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 SORBS2O94875 1100 aaKnown RBP8.96□□□□□ -0.97
TDP1-204ENST00000545686 TMCC1O94876 653 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 FBXO21O94952 628 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 ASLP04424 464 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 SPRP35270 261 aaPredicted RBP8.96□□□□□ -0.97
TDP1-204ENST00000545686 GLUD2P49448 558 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 LIMK2P53671 638 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 ADGRE1Q14246 886 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 HERC3Q15034 1050 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 TLR1Q15399 786 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 CNGA3Q16281 694 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 HSP90AA5PQ58FG0 334 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 VWA5B1Q5TIE3 1220 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 ARMC3Q5W041 872 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 B3GNT6Q6ZMB0 384 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 CLEC14AQ86T13 490 aa8.96□□□□□ -0.97
TDP1-204ENST00000545686 TTC30AQ86WT1 665 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms