RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 PCMTD1Q96MG8 357 aaPredicted RBP17.51■□□□□ 0.39
HOXD8-204ENST00000544999 NPY6RQ99463 290 aa17.51■□□□□ 0.39
HOXD8-204ENST00000544999 MKRN2Q9H000 416 aaKnown RBP17.51■□□□□ 0.39
HOXD8-204ENST00000544999 TMEM51Q9NW97 253 aa17.51■□□□□ 0.39
HOXD8-204ENST00000544999 KIAA1522Q9P206 1035 aaPredicted RBP17.51■□□□□ 0.39
HOXD8-204ENST00000544999 USP36Q9P275 1121 aaKnown RBP17.51■□□□□ 0.39
HOXD8-204ENST00000544999 NOCTQ9UK39 431 aaKnown RBP17.51■□□□□ 0.39
HOXD8-204ENST00000544999 H0Y626 953 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 M0QYT0 321 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 ASLP04424 464 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CYP1A1P04798 512 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 HLA-EP13747 358 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 PTGER3P43115 390 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 FMO1Q01740 532 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CDR2Q01850 454 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 NME3Q13232 169 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CAMK2GQ13555 558 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 RABGAP1LQ5R372 815 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 FAM102AQ5T9C2 384 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 TTC39BQ5VTQ0 682 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 OTUD1Q5VV17 481 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 PEAR1Q5VY43 1037 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 NAA35Q5VZE5 725 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 TCEAL6Q6IPX3 200 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CAVIN1Q6NZI2 390 aaKnown RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 ARMCX6Q7L4S7 300 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 OR2T3Q8NH03 318 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 SLC20A1Q8WUM9 679 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 PRCCQ92733 491 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 TCEAL3Q969E4 200 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 PGAP3Q96FM1 320 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 FBRSQ9HAH7 460 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CD93Q9NPY3 652 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 ITM2CQ9NQX7 267 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 RXFP3Q9NSD7 469 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 EVLQ9UI08 416 aaPredicted RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 INTS6Q9UL03 887 aaKnown RBP17.5■□□□□ 0.39
HOXD8-204ENST00000544999 CEP250Q9BV73 2442 aa17.5■□□□□ 0.39
HOXD8-204ENST00000544999 SMTNL1A8MU46 457 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 KHNYNO15037 678 aaKnown RBP17.49■□□□□ 0.39
HOXD8-204ENST00000544999 NDUFS2O75306 463 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 MOCS3O95396 460 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 F9P00740 461 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 C7P10643 843 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 CD6P30203 668 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 HOXD12P35452 270 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 CSKP41240 450 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 SULT1E1P49888 294 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 RNASE9P60153 205 aaKnown RBP17.49■□□□□ 0.39
HOXD8-204ENST00000544999 ZNF33AQ06730 810 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 FSCBQ5H9T9 825 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 PITRM1Q5JRX3 1037 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 BRMS1LQ5PSV4 323 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 TRIM72Q6ZMU5 477 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 SYT12Q8IV01 421 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 SUN2Q9UH99 717 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 SPTBN4Q9H254 2564 aa17.49■□□□□ 0.39
HOXD8-204ENST00000544999 A0A1B0GVM2 712 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 TCAF2A6NFQ2 919 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ACADMP11310 421 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ATP1A3P13637 1013 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 CHRNB2P17787 502 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 OXTRP30559 389 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 CXCR3P49682 368 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ST8SIA6P61647 398 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 SLC25A52Q3SY17 297 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 STPG1Q5TH74 334 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 FBXL22Q6P050 247 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 SND1Q7KZF4 910 aaKnown RBP eCLIP17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ARCQ7LC44 396 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 DHX40Q8IX18 779 aaKnown RBP17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 KDM1BQ8NB78 822 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 MYO19Q96H55 970 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 EDEM2Q9BV94 578 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ADAM33Q9BZ11 813 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 WDCPQ9H6R7 721 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 PIGVQ9NUD9 493 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 ARHGEF38Q9NXL2 777 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 WSB2Q9NYS7 404 aaPredicted RBP17.48■□□□□ 0.39
HOXD8-204ENST00000544999 TMEM59LQ9UK28 342 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 PILRBQ9UKJ0 227 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 HS3ST4Q9Y661 456 aa17.48■□□□□ 0.39
HOXD8-204ENST00000544999 LNP1A1A4G5 178 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 DCDC2BA2VCK2 349 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 PATE3B3GLJ2 98 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 IGLV3-19P01714 112 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 SRPRAP08240 638 aaKnown RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 TFE3P19532 575 aaPredicted RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 ITPKAP23677 461 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 TPMTP51580 245 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 OXCT1P55809 520 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 DEUP1Q05D60 604 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 AUHQ13825 339 aaKnown RBP17.47■□□□□ 0.39
HOXD8-204ENST00000544999 PLEKHG6Q3KR16 790 aa17.47■□□□□ 0.39
HOXD8-204ENST00000544999 C2CD6Q53TS8 623 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms