RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 GBA3Q9H227 469 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 C12orf65Q9H3J6 166 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 ALG13Q9NP73 1137 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 CASS4Q9NQ75 786 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 HES2Q9Y543 173 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 M0QYT0 321 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 CYB561D2O14569 222 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 TM7SF2O76062 418 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 MPOP05164 745 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PCSK1P29120 753 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PRDX6P30041 224 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PTDSS1P48651 473 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 LIMK2P53671 638 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 ATXN1P54253 815 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 AQP5P55064 265 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 AP1B1Q10567 949 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PDE1CQ14123 709 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 MORN1Q5T089 497 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 METTL21CQ5VZV1 264 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 OLFML2BQ68BL8 750 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 KCTD11Q693B1 232 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PPP1R14CQ8TAE6 165 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 RDH11Q8TC12 318 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 MIEF2Q96C03 454 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 EPAS1Q99814 870 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 CCDC106Q9BWC9 280 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 IL22Q9GZX6 179 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 GPAMQ9HCL2 828 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 XPNPEP3Q9NQH7 507 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 COPG2Q9UBF2 871 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 GJD2Q9UKL4 321 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 TMEM114B3SHH9 223 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 PROCP04070 461 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 FGF3P11487 239 aaPredicted RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 AKAP5P24588 427 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 PSMB4P28070 264 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 COG7P83436 770 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 PDE1BQ01064 536 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 SLC34A1Q06495 639 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 SOX4Q06945 474 aaPredicted RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 GALNT2Q10471 571 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 ILF2Q12905 390 aaKnown RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 SYCP2LQ5T4T6 812 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 PAQR9Q6ZVX9 377 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 ADGRG6Q86SQ4 1221 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 LINC00523Q86TU6 105 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 DNAJB3Q8WWF6 145 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 PGBD4Q96DM1 585 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 RBBP8Q99708 897 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 CXCL16Q9H2A7 254 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 CDHR5Q9HBB8 845 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 CSNK1G1Q9HCP0 422 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 MRGBPQ9NV56 204 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 PPARGC1AQ9UBK2 798 aaKnown RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 NKX1-2Q9UD57 310 aaPredicted RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 CORO1CQ9ULV4 474 aaPredicted RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 SOX13Q9UN79 622 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.37
PAAF1-215ENST00000544909 LRCH1Q9Y2L9 728 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 CDY2AQ9Y6F7 541 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.37
PAAF1-215ENST00000544909 ARHGEF37A1IGU5 675 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 C17orf102A2RUQ5 167 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 PTGESO14684 152 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 TPP1O14773 563 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 CAPN9O14815 690 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 SLC22A2O15244 555 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 DYNC1LI2O43237 492 aaPredicted RBP12.76□□□□□ -0.37
PAAF1-215ENST00000544909 CACNG3O60359 315 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 UGT1A9O60656 530 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 ENTPD5O75356 428 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 CIB2O75838 187 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 MAP3K6O95382 1288 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 C6orf222P0C671 652 aaPredicted RBP12.76□□□□□ -0.37
PAAF1-215ENST00000544909 PTPN3P26045 913 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 MGAT1P26572 445 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 PGM1P36871 562 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 GRIA1P42261 906 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 TKTL1P51854 596 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 TPI1P60174 286 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 TEDDM1Q5T9Z0 273 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 N4BP2L1Q5TBK1 243 aaPredicted RBP12.76□□□□□ -0.37
PAAF1-215ENST00000544909 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 OSTM1Q86WC4 334 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 PTCD2Q8WV60 388 aaKnown RBP12.76□□□□□ -0.37
PAAF1-215ENST00000544909 TMEM40Q8WWA1 233 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
PAAF1-215ENST00000544909 MECRQ9BV79 373 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms