RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SLC7A9P82251 487 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 ATP2C1P98194 919 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 MYL7Q01449 175 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 IFRD2Q12894 506 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 NFATC3Q12968 1075 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 STRN3Q13033 797 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 STARD3Q14849 445 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 ZBTB6Q15916 424 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 KIF19Q2TAC6 998 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 GAB4Q2WGN9 574 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 C10orf76Q5T2E6 689 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TDRD10Q5VZ19 366 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 HAUS3Q68CZ6 603 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 KIAA1324Q6UXG2 1013 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 Q6ZUG5 572 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 PIK3AP1Q6ZUJ8 805 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CD302Q8IX05 232 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 LILRB2Q8N423 598 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TOP6BLQ8N6T0 577 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TERB1Q8NA31 727 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 RNF141Q8WVD5 230 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 SCFD1Q8WVM8 642 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 KCNE4Q8WWG9 221 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 BRF1Q92994 677 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TP53INP1Q96A56 240 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 SKA1Q96BD8 255 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TOE1Q96GM8 510 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CNDP2Q96KP4 475 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 MRGPRX1Q96LB2 322 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CYP2S1Q96SQ9 504 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 NUP58Q9BVL2 599 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TARS2Q9BW92 718 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 GPR174Q9BXC1 333 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 ASPNQ9BXN1 380 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 EPN3Q9H201 632 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 C7orf69Q9H7B7 122 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 C17orf75Q9HAS0 396 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CPNE5Q9HCH3 593 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 KMT5AQ9NQR1 393 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 WSB2Q9NYS7 404 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 TRPM5Q9NZQ8 1165 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 USP36Q9P275 1121 aaKnown RBP4.35□□□□□ -1.71
SNHG1-220ENST00000544550 CLCA2Q9UQC9 943 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 ANKRD6Q9Y2G4 727 aa4.35□□□□□ -1.71
SNHG1-220ENST00000544550 NUP205Q92621 2012 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 SPAG17Q6Q759 2223 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 TTC26A0AVF1 554 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 HMX2A2RU54 273 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 C2orf78A6NCI8 922 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ANTXRLA6NF34 631 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 H0YCG3 227 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 K7ENP7 123 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CYB561D2O14569 222 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ABLIM1O14639 778 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 KLK10O43240 276 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 HOXC11O43248 304 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CBFA2T2O43439 604 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 NEMFO60524 1076 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 IGLV3-19P01714 112 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 TP53P04637 393 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CLTAP09496 248 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 FAM87AP0C7U9 286 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CXCL8P10145 99 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ACADMP11310 421 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CR2P20023 1033 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 GLDCP23378 1020 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 RPA1P27694 616 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ADMP35318 185 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 MATR3P43243 847 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 NPTX2P47972 431 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CSNK1EP49674 416 aaKnown RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ACADVLP49748 655 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 TAF6P49848 677 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 PEX3P56589 373 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ERVPABLB-1P60509 514 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ASIC1P78348 528 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 BNC1Q01954 994 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 MCL1Q07820 350 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 NPY5RQ15761 445 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CFAP221Q4G0U5 840 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ZC2HC1CQ53FD0 456 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 SPATA1Q5VX52 437 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 GRAMD4Q6IC98 578 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 INO80CQ6PI98 192 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 RHBDF2Q6PJF5 856 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 OGFOD3Q6PK18 319 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 BLOC1S2Q6QNY1 142 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ZPBP2Q6X784 338 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 USP49Q70CQ1 688 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 SPATC1Q76KD6 591 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ADAT2Q7Z6V5 191 aaKnown RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 ZAR1Q86SH2 424 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 CATSPER3Q86XQ3 398 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 SFTPA1Q8IWL2 248 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 LRRC15Q8TF66 581 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 RFFLQ8WZ73 363 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 SNX19Q92543 992 aa4.34□□□□□ -1.71
SNHG1-220ENST00000544550 PRCCQ92733 491 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-220ENST00000544550 NAF1Q96HR8 494 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms