RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TRIM13O60858 407 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 EFCAB14O75071 495 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 VCLP18206 1134 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 FMO4P31512 558 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 NOS2P35228 1153 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 PRKCIP41743 596 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 NPY2RP49146 381 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 PARVBQ9HBI1 364 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 GDF3Q9NR23 364 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SYNPO2Q9UMS6 1093 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SIGLEC16A6NMB1 481 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 CES2O00748 559 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 RTN3O95197 1032 aaPredicted RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 TRUB2O95900 331 aaKnown RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 ABCB1P08183 1280 aaPredicted RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 ADRA1DP25100 572 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SERPINB3P29508 390 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 CNGA2Q16280 664 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SLC22A9Q8IVM8 553 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 LZTR1Q8N653 840 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 C12orf29Q8N999 325 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 CASP10Q92851 521 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 APOPT1Q96IL0 206 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 RAD18Q9NS91 495 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 KRT87PA6NCN2 255 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 KPNA3O00505 521 aaPredicted RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 SERPINE1P05121 402 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 MAPK1P28482 360 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 PEX5P50542 639 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 NEK2P51955 445 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 CCL23P55773 120 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 RUNX1T1Q06455 604 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SPANXN3Q5MJ09 141 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 RIPOR1Q6ZS17 1223 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 TMEM237Q96Q45 408 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 USE1Q9NZ43 259 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 SH3BP4Q9P0V3 963 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 FAM237AA0A1B0GTK4 181 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 RASSF9O75901 435 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 GRK3P35626 688 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 MMP13P45452 471 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 TBL3Q12788 808 aaKnown RBP13.07□□□□□ -0.32
CHD4-211ENST00000544484 RAP1GAP2Q684P5 730 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 GPR142Q7Z601 462 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 ETNK2Q9NVF9 386 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 TAS2R13Q9NYV9 303 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 ZMYM5Q9UJ78 669 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 FAM50BQ9Y247 325 aa13.07□□□□□ -0.32
CHD4-211ENST00000544484 HNRNPCP07910 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHD4-211ENST00000544484 CAPZA2P47755 286 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 SDHAF4Q5VUM1 108 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 DNAJC14Q6Y2X3 702 aaPredicted RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 MAGEB10Q96LZ2 347 aaPredicted RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 TDRKHQ9Y2W6 561 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 RAD54BQ9Y620 910 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 DAB1O75553 588 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 NPR3P17342 541 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 TUFMP49411 452 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 RPL7AP62424 266 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 TCHHL1Q5QJ38 904 aaPredicted RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 LRRC8DQ7L1W4 858 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 FAM71AQ8IYT1 594 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 TMEM86AQ8N2M4 240 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 SEPHS2Q99611 448 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 MRPL9Q9BYD2 267 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 RXFP1Q9HBX9 757 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 FCHO1O14526 889 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 ACADMP11310 421 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 FMO1Q01740 532 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 ACAP1Q15027 740 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 TMEM159Q96B96 161 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 CPNE1Q99829 537 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 SNRNP25Q9BV90 132 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 BTN3A1O00481 513 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 DARSP14868 501 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 PTPN4P29074 926 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 BCL2L1Q07817 233 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 EML3Q32P44 896 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 FNDC5Q8NAU1 212 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 FAM120BQ96EK7 910 aaKnown RBP13.06□□□□□ -0.32
CHD4-211ENST00000544484 SERAC1Q96JX3 654 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 PRKD2Q9BZL6 878 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 BATF3Q9NR55 127 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 TRAF2Q12933 501 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 PRKAA1Q13131 559 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms