RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TGM3Q08188 693 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 LGALS3BPQ08380 585 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 XRCC4Q13426 336 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ZNF470Q6ECI4 717 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 EFCAB3Q8N7B9 438 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 MAP3K14Q99558 947 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 GANQ9H2C0 597 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 GALNT8Q9NY28 637 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 SETD1BQ9UPS6 1966 aaKnown RBP15.75■□□□□ 0.11
CHD4-210ENST00000544040 BTN3A1O00481 513 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 SSNA1O43805 119 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 PSMG1O95456 288 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 S100A9P06702 114 aaKnown RBP15.75■□□□□ 0.11
CHD4-210ENST00000544040 ATP4AP20648 1035 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 CCR1P32246 355 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 RBBP4Q09028 425 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 MAD2L1Q13257 205 aaPredicted RBP15.75■□□□□ 0.11
CHD4-210ENST00000544040 NR1D2Q14995 579 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 IL27RAQ6UWB1 636 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 IL25Q9H293 177 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 HMG20AQ9NP66 347 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 PGAM1P18669 254 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 LRPAP1P30533 357 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 RPA3P35244 121 aaPredicted RBP15.75■□□□□ 0.11
CHD4-210ENST00000544040 CDK16Q00536 496 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 PYDC2Q56P42 97 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 B3GNT6Q6ZMB0 384 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 GPRC5AQ8NFJ5 357 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 NAT9Q9BTE0 207 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 PDCD10Q9BUL8 212 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 ZNRF3Q9ULT6 936 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 BTBD3Q9Y2F9 522 aa15.75■□□□□ 0.11
CHD4-210ENST00000544040 MTRF1O75570 445 aaKnown RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 ABCG1P45844 678 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 LLGL2Q6P1M3 1020 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 DSG4Q86SJ6 1040 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 FAM20CQ8IXL6 584 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ZNF184Q99676 751 aaPredicted RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 GGA3Q9NZ52 723 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 COQ6Q9Y2Z9 468 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 H7C4K7 107 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 F9P00740 461 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 DOK6Q6PKX4 331 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 TMC3Q7Z5M5 1100 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 TAF8Q7Z7C8 310 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ADAM32Q8TC27 787 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CHID1Q9BWS9 393 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 SEMA4BQ9NPR2 832 aaPredicted RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 RNASEH1O60930 286 aaKnown RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 VAPBO95292 243 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ITGA3P26006 1051 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 POLD2P49005 469 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ELF3P78545 371 aaPredicted RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 PPATQ06203 517 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 MRPS31Q92665 395 aaKnown RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 S100A13Q99584 98 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CPNE1Q99829 537 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 C1orf50Q9BV19 199 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 PCDH9Q9HC56 1237 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CRYL1Q9Y2S2 319 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 C2CD2Q9Y426 696 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 TBKBP1A7MCY6 615 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 PECAM1P16284 738 aaPredicted RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 IDH2P48735 452 aaKnown RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 PGBD2Q6P3X8 592 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 OLFML1Q6UWY5 402 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 C8orf59Q8N0T1 100 aaPredicted RBP15.74■□□□□ 0.11
CHD4-210ENST00000544040 PROX1Q92786 737 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 TMEM138Q9NPI0 162 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 FBXO28Q9NVF7 368 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 AMPD1P23109 780 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 MYBPC2Q14324 1141 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 PMF1Q6P1K2 205 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CYP20A1Q6UW02 462 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 CACUL1Q86Y37 369 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 HIPK1Q86Z02 1210 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ACTRT2Q8TDY3 377 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 HGH1Q9BTY7 390 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 EPB41L4BQ9H329 900 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 ZFYVE28Q9HCC9 887 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 NDOR1Q9UHB4 597 aa15.74■□□□□ 0.11
CHD4-210ENST00000544040 GPR15P49685 360 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 OR56A4Q8NGH8 313 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 PSMA8Q8TAA3 256 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 ATXN2LQ8WWM7 1075 aaKnown RBP15.73■□□□□ 0.11
CHD4-210ENST00000544040 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 A0A087WXM4 84 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 FGRP09769 529 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 DNAJB2P25686 324 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 GSTT1P30711 240 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 CRATP43155 626 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 ARHGEF19Q8IW93 802 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 GLT6D1Q7Z4J2 308 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 SPACA7Q96KW9 195 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 TBL1YQ9BQ87 522 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 EHD4Q9H223 541 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 RHBGQ9H310 441 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms