RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 LMNAP02545 664 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 TDGF1P13385 188 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 KDELR1P24390 212 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 ADORA2BP29275 332 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 MIPP30301 263 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 CTHP32929 405 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 AVPR1AP37288 418 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 NR2C2P49116 596 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 PSEN1P49768 467 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 KLF1Q13351 362 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 MDH1BQ5I0G3 518 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 RAB41Q5JT25 222 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 PM20D1Q6GTS8 502 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 FAM183BPQ6ZVS7 135 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 BBS12Q6ZW61 710 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 KRT222Q8N1A0 295 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 SYNPOQ8N3V7 929 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 PRELID2Q8N945 189 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 CSGALNACT1Q8TDX6 532 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 USP13Q92995 863 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 MYLPFQ96A32 169 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 C8orf48Q96LL4 319 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 RUFY1Q96T51 708 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF670Q9BS34 389 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 DDX47Q9H0S4 455 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 THG1LQ9NWX6 298 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 AMACRQ9UHK6 382 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 DMGDHQ9UI17 866 aaKnown RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 OBSL1O75147 1896 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF292O60281 2723 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 GREB1Q4ZG55 1949 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 APOC4-APOC2K7ER74 178 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CAPN9O14815 690 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CALCAP01258 141 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 APOC2P02655 101 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 ITGAVP06756 1048 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 RARAP10276 462 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 RALAP11233 206 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 TGM2P21980 687 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 ACTN2P35609 894 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CDKN2BP42772 138 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 PPP3CCP48454 512 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 EIF3BP55884 814 aaKnown RBP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 SLC25A11Q02978 314 aaKnown RBP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 MTAPQ13126 283 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CCINQ13939 588 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 HLTFQ14527 1009 aaKnown RBP eCLIP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CASP8Q14790 479 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 DGKKQ5KSL6 1271 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 ERMARDQ5T6L9 678 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 SDHAF4Q5VUM1 108 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 DUPD1Q68J44 220 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 TXNDC8Q6A555 127 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CLEC20AQ6ZU45 233 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 JAMLQ86YT9 394 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 MAB21L3Q8N8X9 362 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 SUMF1Q8NBK3 374 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 FAM71BQ8TC56 605 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 NT5C3BQ969T7 300 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 CDK5RAP1Q96SZ6 601 aaKnown RBP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 FUT8Q9BYC5 575 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 B3GNT5Q9BYG0 378 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 FRMD8Q9BZ67 464 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-217ENST00000543537 DCLK3Q9C098 648 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 BRD8Q9H0E9 1235 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 ZSCAN32Q9NX65 697 aa11.88□□□□□ -0.51
COPS7A-217ENST00000543537 hCG_1818297A0A087WSY0 165 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ZBED1O96006 694 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 SLC2A3P11169 496 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 CCDC130P13994 396 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 BDNFP23560 247 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 HOXA6P31267 233 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ARL4AP40617 200 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 HCAR3P49019 387 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 CCR3P51677 355 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 TKTL1P51854 596 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 CDR1P51861 262 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 TAS2R40P59535 323 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 USP4Q13107 963 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ORC1Q13415 861 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 XRCC4Q13426 336 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 PTK6Q13882 451 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 BYSLQ13895 437 aaKnown RBP11.87□□□□□ -0.51
COPS7A-217ENST00000543537 LRRC32Q14392 662 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 GAS6Q14393 721 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 KRT81Q14533 505 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ZNF77Q15935 545 aa11.87□□□□□ -0.51
COPS7A-217ENST00000543537 ITPRIPL2Q3MIP1 535 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms