RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 MYCBPQ99417 103 aaPredicted RBP4.52□□□□□ -1.69
MDM2-229ENST00000543046 NCAPGQ9BPX3 1015 aa4.52□□□□□ -1.69
MDM2-229ENST00000543046 CCDC134Q9H6E4 229 aa4.52□□□□□ -1.69
MDM2-229ENST00000543046 RBM28Q9NW13 759 aaKnown RBP4.52□□□□□ -1.69
MDM2-229ENST00000543046 RNF7Q9UBF6 113 aa4.52□□□□□ -1.69
MDM2-229ENST00000543046 B3GNT3Q9Y2A9 372 aa4.52□□□□□ -1.69
MDM2-229ENST00000543046 MORC2Q9Y6X9 1032 aaPredicted RBP4.52□□□□□ -1.69
MDM2-229ENST00000543046 RUSC2Q8N2Y8 1516 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 SPATA31A5Q5VU36 1347 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 SPATA31A7Q8IWB4 1347 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 MAPK8IP3Q9UPT6 1336 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 INO80B-WBP1J3KQ70 363 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 TRIM38O00635 465 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 KIF1CO43896 1103 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 TOP3BO95985 862 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 CSTBP04080 98 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 ENO1P06733 434 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 ITGA2BP08514 1039 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 CAPN2P17655 700 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 RPS6KB1P23443 525 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 HOXD9P28356 352 aaPredicted RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 HOXA7P31268 230 aaPredicted RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 DDIT3P35638 169 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 SERPINF1P36955 418 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 RPS13P62277 151 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 BLMHQ13867 455 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 TRIM60Q495X7 471 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 SLC9C1Q4G0N8 1177 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 GLE1Q53GS7 698 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 PAPD7Q5XG87 772 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 EGFL6Q8IUX8 553 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 SRFBP1Q8NEF9 429 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 SMG7Q92540 1137 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 TRMT61AQ96FX7 289 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 RTKNQ9BST9 563 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 MECRQ9BV79 373 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 TRIM2Q9C040 744 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 VPS16Q9H269 839 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 UPF2Q9HAU5 1272 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 PRDM16Q9HAZ2 1276 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 SMC4Q9NTJ3 1288 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 TRNAU1APQ9NX07 287 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 TUBA8Q9NY65 449 aaPredicted RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 RAI14Q9P0K7 980 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 LRFN1Q9P244 771 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 RAB21Q9UL25 225 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 ZBTB1Q9Y2K1 713 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 BRD4O60885 1362 aaPredicted RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 ROCK2O75116 1388 aaKnown RBP4.51□□□□□ -1.69
MDM2-229ENST00000543046 KDM5BQ9UGL1 1544 aa4.51□□□□□ -1.69
MDM2-229ENST00000543046 BAZ1AQ9NRL2 1556 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 SLC22A23A1A5C7 686 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM90A18PA6NE21 464 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM90A16PA6NEW6 464 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 C2CD4BA6NLJ0 364 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM90A5PA8MXJ8 464 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 ACKR2O00590 384 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 PPP6R2O75170 966 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 USP12O75317 370 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 KAT7O95251 611 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 CD63P08962 238 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM90A15PP0C7V4 464 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM90A14PP0C7W9 464 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 CTSAP10619 480 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 PEPDP12955 493 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 SOX2P48431 317 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 FAM3BP58499 235 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 ID2Q02363 134 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 TLE3Q04726 772 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 SF3A3Q12874 501 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■■□□□ 12.7
MDM2-229ENST00000543046 STIM1Q13586 685 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 TRIM14Q14142 442 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 CCDC38Q502W7 563 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 EARS2Q5JPH6 523 aaKnown RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 ZNF569Q5MCW4 686 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 ATPAF1Q5TC12 328 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 ZNF425Q6IV72 752 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 LIN54Q6MZP7 749 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 C11orf87Q6NUJ2 197 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 DHRS13Q6UX07 377 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 SLC39A5Q6ZMH5 540 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 UBE2Q1Q7Z7E8 422 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 RHPN2Q8IUC4 686 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 ENAHQ8N8S7 591 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 MNS1Q8NEH6 495 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 HMGB4Q8WW32 186 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 IGFBPL1Q8WX77 278 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 SNX21Q969T3 373 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 COQ8BQ96D53 544 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 SPRTNQ9H040 489 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 TMEM184CQ9NVA4 438 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 DACT1Q9NYF0 836 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 HERC5Q9UII4 1024 aaKnown RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 TRPC5Q9UL62 973 aaPredicted RBP4.5□□□□□ -1.69
MDM2-229ENST00000543046 TNFRSF18Q9Y5U5 241 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms