RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 DLGAP2Q9P1A6 1054 aa17.66■□□□□ 0.42
RABGGTA-203ENST00000543002 PCSK1NQ9UHG2 260 aa17.66■□□□□ 0.42
RABGGTA-203ENST00000543002 MIA3Q5JRA6 1907 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 A0A0A6YYK5 440 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 A0A1B0GVM2 712 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 RCCD1A6NED2 376 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 TCAF2A6NFQ2 919 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 K7EQS6 105 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 ARHGAP6O43182 974 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 SRGAP2O75044 1071 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 LUC7L3O95232 432 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 DCNP07585 359 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 L1CAMP32004 1257 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 MAN1A1P33908 653 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 ARHGAP25P42331 645 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 MAGEA9P43362 315 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 TNFRSF4P43489 277 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 RPS9P46781 194 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 IRAK1P51617 712 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 VAV2P52735 878 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 HADHBP55084 474 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 ERMARDQ5T6L9 678 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 MANEALQ5VSG8 457 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 DAB2IPQ5VWQ8 1189 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 CYP4V2Q6ZWL3 525 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 CHST9Q7L1S5 443 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 CIR1Q86X95 450 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 PSTKQ8IV42 348 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 CCDC117Q8IWD4 279 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 CCAR2Q8N163 923 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 CARNMT1Q8N4J0 409 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 TMEM105Q8N8V8 129 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 WFDC5Q8TCV5 224 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 PDLIM2Q96JY6 352 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 SNRNP25Q9BV90 132 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 PPARGC1AQ9UBK2 798 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 TFR2Q9UP52 801 aa17.65■□□□□ 0.42
RABGGTA-203ENST00000543002 ZDBF2Q9HCK1 2354 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 FAM72CH0Y354 149 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 H0Y626 953 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 PJA2O43164 708 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 CLDN11O75508 207 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 IL1R2P27930 398 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 HLA-FP30511 346 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 AVPR2P30518 371 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 CDH4P55283 916 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 CDH18Q13634 790 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 MESDQ14696 234 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 BOLA3Q53S33 107 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 FAM72AQ5TYM5 149 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 FAM72DQ6L9T8 149 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 KIAA0907Q7Z7F0 614 aaPredicted RBP17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 FAM72BQ86X60 149 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 SFTPA1Q8IWL2 248 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 PYROXD2Q8N2H3 581 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 CCDC26Q8TAB7 109 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 DESI2Q9BSY9 194 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 LRFN3Q9BTN0 628 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 CHRDQ9H2X0 955 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 ABCB8Q9NUT2 735 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 AP4E1Q9UPM8 1137 aa17.64■□□□□ 0.41
RABGGTA-203ENST00000543002 BTNL10A8MVZ5 291 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 PRRT4C9JH25 899 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 NRDCO43847 1150 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 CNTN5O94779 1100 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 LRIG2O94898 1065 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 PABPC1P11940 636 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 TCF4P15884 667 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 NOP2P46087 812 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 CCZ1BP86790 482 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 CCZ1P86791 482 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 SLC25A11Q02978 314 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 SEMA3BQ13214 749 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 HADHQ16836 314 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 GEN1Q17RS7 908 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 ALFQ53S48 1182 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 FSCBQ5H9T9 825 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 ANKS1BQ7Z6G8 1248 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 KIAA1328Q86T90 577 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 TXLNBQ8N3L3 684 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 WFIKKN2Q8TEU8 576 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 LMLNQ96KR4 655 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 ZYG11BQ9C0D3 744 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 LACRTQ9GZZ8 138 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 GPATCH2LQ9NWQ4 482 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 MPP6Q9NZW5 540 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 KIAA1522Q9P206 1035 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 GGA2Q9UJY4 613 aa17.63■□□□□ 0.41
RABGGTA-203ENST00000543002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 TMEM110-MUSTN1A8MSY1 372 aa17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 RNF40O75150 1001 aa17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 CD70P32970 193 aa17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 OXCT1P55809 520 aa17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 LMAN2Q12907 356 aa17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 ZNF177Q13360 481 aaPredicted RBP17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 CA9Q16790 459 aa17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 CXorf57Q6NSI4 855 aaKnown RBP17.62■□□□□ 0.41
RABGGTA-203ENST00000543002 CPNE8Q86YQ8 564 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms