RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 ZNF776Q68DI1 518 aaPredicted RBP12.31□□□□□ -0.44
PTPN6-219ENST00000542848 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 USP30Q70CQ3 517 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 MFN1Q8IWA4 741 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 HJURPQ8NCD3 748 aaPredicted RBP12.31□□□□□ -0.44
PTPN6-219ENST00000542848 LMO3Q8TAP4 145 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 MYO19Q96H55 970 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 SERPINB11Q96P15 392 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
PTPN6-219ENST00000542848 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
PTPN6-219ENST00000542848 TM9SF3Q9HD45 589 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 TLR6Q9Y2C9 796 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 SNX11Q9Y5W9 270 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
PTPN6-219ENST00000542848 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 PIK3R2O00459 728 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 PCDHGA12O60330 932 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 DFNA5O60443 496 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 RNASEH1O60930 286 aaKnown RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 FSBPO95073 299 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 FYNP06241 537 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 RPL34P49207 117 aaKnown RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 GCNT1Q02742 428 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 HNRNPA1L2Q32P51 320 aaKnown RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 CCDC40Q4G0X9 1142 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 FOXR2Q6PJQ5 311 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 BEND5Q7L4P6 421 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 CLEC4CQ8WTT0 213 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 FCRL2Q96LA5 508 aaPredicted RBP12.3□□□□□ -0.44
PTPN6-219ENST00000542848 TOR4AQ9NXH8 423 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 STIM2Q9P246 746 aa12.3□□□□□ -0.44
PTPN6-219ENST00000542848 CELSR3Q9NYQ7 3312 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 IGSF10Q6WRI0 2623 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 TARSL2A2RTX5 802 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 PAPSS1O43252 624 aaPredicted RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 SRPRAP08240 638 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 ATXN1LP0C7T5 689 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 CSKP41240 450 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 CTSKP43235 329 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 GPD2P43304 727 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 ACADSBP45954 432 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 CCT8P50990 548 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 MS4A13Q5J8X5 152 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 KIAA0895LQ68EN5 471 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 GALNT15Q8N3T1 639 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 EHBP1Q8NDI1 1231 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 KAT5Q92993 513 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 SLC39A13Q96H72 371 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 MRGPRX3Q96LB0 322 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 ORAI3Q9BRQ5 295 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 TRIM62Q9BVG3 475 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 MIS12Q9H081 205 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 FBXL12Q9NXK8 326 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
PTPN6-219ENST00000542848 CNTN6Q9UQ52 1028 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 ERVW-1Q9UQF0 538 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
PTPN6-219ENST00000542848 A0A1W2PPC4 97 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 BICDL2A1A5D9 508 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 KCNK3O14649 394 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 VILLO15195 856 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 TNFSF14O43557 240 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 SIN3BO75182 1162 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
PTPN6-219ENST00000542848 MOCS3O95396 460 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 IGHV4-34P06331 123 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
PTPN6-219ENST00000542848 GRK6P43250 576 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 GALCP54803 685 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 RACK1P63244 317 aaKnown RBP12.28□□□□□ -0.44
PTPN6-219ENST00000542848 CDH18Q13634 790 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 MEA1Q16626 185 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 PITRM1Q5JRX3 1037 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 C9orf64Q5T6V5 341 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 RRAGAQ7L523 313 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
PTPN6-219ENST00000542848 GANCQ8TET4 914 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 STK32AQ8WU08 396 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 SKA1Q96BD8 255 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 PRICKLE1Q96MT3 831 aaPredicted RBP12.28□□□□□ -0.44
PTPN6-219ENST00000542848 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 ST7Q9NRC1 585 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms