RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 COA7Q96BR5 231 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC51Q96ER9 411 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 STAMBPL1Q96FJ0 436 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 NAF1Q96HR8 494 aaKnown RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 FBXL20Q96IG2 436 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CATSPER2Q96P56 530 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 PANX2Q96RD6 677 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 WDR24Q96S15 920 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 NDNQ99608 321 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 TIPINQ9BVW5 301 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 PUS3Q9BZE2 481 aaKnown RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 XPO4Q9C0E2 1151 aaKnown RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 NDST4Q9H3R1 872 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 HAUS2Q9NVX0 235 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 RMND1Q9NWS8 449 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 ASB6Q9NWX5 421 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 HOXC10Q9NYD6 342 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 IL1RAPL1Q9NZN1 696 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 TBC1D7Q9P0N9 293 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 LRRC42Q9Y546 428 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CYP46A1Q9Y6A2 500 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 SLIT3O75094 1523 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 ADCY9O60503 1353 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 COL15A1P39059 1388 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 ANKARQ7Z5J8 1434 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 PNMA6EA0A0J9YXQ4 647 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 LRRC3CA6NJW4 275 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 AGPSO00116 658 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TOR1BO14657 336 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 GABRDO14764 452 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 IFIT3O14879 490 aaKnown RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 PFDN1O60925 122 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 UBTFL1P0CB47 393 aaPredicted RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SRGNP10124 158 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 ZKSCAN1P17029 563 aaPredicted RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 RPL17P18621 184 aaKnown RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 POLR2EP19388 210 aaKnown RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 ATP6V1C1P21283 382 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TCF7P36402 384 aaPredicted RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 MLH1P40692 756 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 MC2RQ01718 297 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TLE1Q04724 770 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 ST3GAL1Q11201 340 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 ZBTB17Q13105 803 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 KRT32Q14532 448 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 NONOQ15233 471 aaKnown RBP eCLIP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 BCL2A1Q16548 175 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 KRT24Q2M2I5 525 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 CFAP58Q5T655 872 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 NCAPH2Q6IBW4 605 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 VWA1Q6PCB0 445 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 PACS1Q6VY07 963 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 C3orf62Q6ZUJ4 267 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TMEM139Q8IV31 216 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 FAM186BQ8IYM0 893 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 CFAP52Q8N1V2 620 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 MREGQ8N565 214 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TTC39CQ8N584 583 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 AOPEPQ8N6M6 819 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SYT2Q8N9I0 419 aaPredicted RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 PDPRQ8NCN5 879 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TOR1AIP2Q8NFQ8 470 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 AENQ8WTP8 325 aaKnown RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 TFAP2BQ92481 460 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 LPIN2Q92539 896 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 EVI5LQ96CN4 794 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 LRRC45Q96CN5 670 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 HVCN1Q96D96 273 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 GPATCH3Q96I76 525 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SNX27Q96L92 541 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 IFT74Q96LB3 600 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 OLFM3Q96PB7 478 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 HAPLN3Q96S86 360 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 CCT8L2Q96SF2 557 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 LLPHQ9BRT6 129 aaKnown RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SELENOOQ9BVL4 669 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SUCLA2Q9P2R7 463 aaPredicted RBP6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SLC17A6Q9P2U8 582 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 BAIAP2L1Q9UHR4 511 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 SLC12A4Q9UP95 1085 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 ITM2BQ9Y287 266 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 CARD8Q9Y2G2 431 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 NR2E3Q9Y5X4 410 aa6.19□□□□□ -1.42
XRCC4-206ENST00000542685 PLEKHG1Q9ULL1 1385 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 LTN1O94822 1766 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC195A0A1B0GUA6 201 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TMEM247A6NEH6 219 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 FZD9O00144 591 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 PPIP5K2O43314 1243 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 STRNO43815 780 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 STAM2O75886 525 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 C1QL1O75973 258 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 SUN1O94901 812 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 PDGFRBP09619 1106 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CALB2P22676 271 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CASP14P31944 242 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 HOXD12P35452 270 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 MDH1P40925 334 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms