RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 FAM131BQ86XD5 332 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 MFN1Q8IWA4 741 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CHPFQ8IZ52 775 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 APCDD1Q8J025 514 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CARNMT1Q8N4J0 409 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 HJURPQ8NCD3 748 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 MSANTD4Q8NCY6 345 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 C3orf20Q8ND61 904 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 TSTD1Q8NFU3 115 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 SYN2Q92777 582 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 DDX50Q9BQ39 737 aaKnown RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 TPSD1Q9BZJ3 242 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CIPCQ9C0C6 399 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 SLC12A6Q9UHW9 1150 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 GGA2Q9UJY4 613 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 VANGL2Q9ULK5 521 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 STAP1Q9ULZ2 295 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 STON1Q9Y6Q2 735 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 ZFHX2Q9C0A1 2572 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 TCRBV21S2A2A0A5A6 115 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 F5H5T6 163 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 FAM72CH0Y354 149 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 TIMM44O43615 452 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 LUC7L3O95232 432 aaKnown RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 F9P00740 461 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 CALB1P05937 261 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 PABPC1P11940 636 aaKnown RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 GZMAP12544 262 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 HLA-EP13747 358 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 HOXB2P14652 356 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 GABRG2P18507 467 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 PRKCHP24723 683 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 MZF1P28698 734 aaPredicted RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 ADRA1BP35368 520 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 SIM2Q14190 667 aaPredicted RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 ZNF234Q14588 700 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 CDO1Q16878 200 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ALFQ53S48 1182 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 BRMS1LQ5PSV4 323 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 FAM72AQ5TYM5 149 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 MBLAC2Q68D91 279 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 FAM72DQ6L9T8 149 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 CXorf57Q6NSI4 855 aaKnown RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 KBTBD6Q86V97 674 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 FAM72BQ86X60 149 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 VSTM4Q8IW00 320 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 FAM160A2Q8N612 972 aaPredicted RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 ARFGAP1Q8N6T3 406 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ZNF366Q8N895 744 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 GAB3Q8WWW8 586 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 RLN3Q8WXF3 142 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 TTC17Q96AE7 1141 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ALG14Q96F25 216 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 MYO19Q96H55 970 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 MRGPRX3Q96LB0 322 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 C1orf74Q96LT6 269 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 TMEM245Q9H330 911 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 MTG2Q9H4K7 406 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 CD93Q9NPY3 652 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ARHGAP20Q9P2F6 1191 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ADAMTS1Q9UHI8 967 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 MBD1Q9UIS9 605 aaPredicted RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 LUC7L2Q9Y383 392 aaKnown RBP10.05□□□□□ -0.8
YBX3-212ENST00000542002 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 ITIH6Q6UXX5 1313 aa10.05□□□□□ -0.8
YBX3-212ENST00000542002 WDR87Q6ZQQ6 2873 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 A0A087X0T9 212 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 H0Y626 953 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SRGAP2O75044 1071 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 RTN2O75298 545 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 RPP40O75818 363 aaKnown RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 FAM228BP0C875 321 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 BCKDHBP21953 392 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 TGM1P22735 817 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SDC4P31431 198 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 HNRNPH3P31942 346 aaKnown RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 CNR2P34972 360 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 RDXP35241 583 aaKnown RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 CSKP41240 450 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 PTPN9P43378 593 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 ZNF143P52747 638 aaPredicted RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 ZNF252P-AS1Q0IIN9 211 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SPECC1LQ69YQ0 1117 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 PLEKHA7Q6IQ23 1121 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 DNAJC24Q6P3W2 148 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 PRR23BQ6ZRT6 265 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SND1Q7KZF4 910 aaKnown RBP eCLIP10.04□□□□□ -0.8
YBX3-212ENST00000542002 TRMT11Q7Z4G4 463 aaKnown RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 CCDC185Q8N715 623 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms