RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 HNMTP50135 292 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 MXI1P50539 228 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 RBM5P52756 815 aaKnown RBP eCLIP5.8□□□□□ -1.48
DDB1-219ENST00000541513 POLGP54098 1239 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 RRP1P56182 461 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 PCBP3P57721 371 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 GMFBP60983 142 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 POU6F2P78424 691 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 MGAT5Q09328 741 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 TBL3Q12788 808 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 SMAD4Q13485 552 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 R3HDM1Q15032 1099 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 NFIL3Q16649 462 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 MST1LQ2TV78 715 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 CRY2Q49AN0 593 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 DCAF17Q5H9S7 520 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 TRAPPC3LQ5T215 181 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 MEX3BQ6ZN04 569 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 C15orf52Q6ZUT6 534 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 LPCAT2Q7L5N7 544 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 TMEM200AQ86VY9 491 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 RASGRP3Q8IV61 690 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 RTL3Q8N8U3 475 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 SYT2Q8N9I0 419 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 C2CD4AQ8NCU7 369 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 CNNM3Q8NE01 707 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 OR6J1Q8NGC5 347 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 SETD6Q8TBK2 473 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 SMCR8Q8TEV9 937 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 DUSP19Q8WTR2 217 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 FAM216AQ8WUB2 273 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 HIST1H2AHQ96KK5 128 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 LENG8Q96PV6 779 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 GCNAQ96QF7 691 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 MED15Q96RN5 788 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 TXN2Q99757 166 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 HIST1H2AJQ99878 128 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 SYT17Q9BSW7 474 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 C1orf43Q9BWL3 253 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 HAPLN2Q9GZV7 340 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 RNF208Q9H0X6 261 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 TAOK3Q9H2K8 898 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 ST6GALNAC4Q9H4F1 302 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 RPAP3Q9H6T3 665 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 RMI1Q9H9A7 625 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 LTB4R2Q9NPC1 389 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.8□□□□□ -1.48
DDB1-219ENST00000541513 MBNL1Q9NR56 388 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 BEX4Q9NWD9 120 aaPredicted RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 HYPKQ9NX55 129 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 DDX43Q9NXZ2 648 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 GALNT8Q9NY28 637 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 LIMA1Q9UHB6 759 aaKnown RBP5.8□□□□□ -1.48
DDB1-219ENST00000541513 KCND3Q9UK17 655 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 SARDHQ9UL12 918 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 TCFL5Q9UL49 500 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 CNTN6Q9UQ52 1028 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 TRIM17Q9Y577 477 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 POMT1Q9Y6A1 747 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 KCNE2Q9Y6J6 123 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 FPGT-TNNI3KV9GXZ4 949 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 LRP5O75197 1615 aa5.8□□□□□ -1.48
DDB1-219ENST00000541513 NRXN2Q9P2S2 1712 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 USP42Q9H9J4 1324 aaKnown RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 KIF13BQ9NQT8 1826 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 TRAV34A0A0B4J273 112 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 MYO1GB0I1T2 1018 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ACOT7O00154 380 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 DLL1O00548 723 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 SLC27A2O14975 620 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 RECQL5O94762 991 aaPredicted RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 PDE8BO95263 885 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 OR2C1O95371 312 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 AMY1AP04745 511 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 GJB1P08034 283 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ALADP13716 330 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 CPT2P23786 658 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ECHS1P30084 290 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 RFC4P35249 363 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 WNT3P56703 355 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 TGFB2P61812 414 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 YPEL5P62699 121 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 CYP4A11Q02928 519 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 PTSQ03393 145 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 SCN1BQ07699 218 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 CAPSQ13938 189 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 SLC29A2Q14542 456 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 RPS6KA2Q15349 733 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 PROSER3Q2NL68 480 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 GALNTL6Q49A17 601 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ZRANB3Q5FWF4 1079 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 C12orf60Q5U649 245 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 PRAMEF18Q5VWM3 479 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 PLAG1Q6DJT9 500 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 RINT1Q6NUQ1 792 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 TMEM154Q6P9G4 183 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 SUSD1Q6UWL2 747 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 OLFM4Q6UX06 510 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 Q6ZVL8 140 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 LINC00346Q8IVM7 164 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms