RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ARHGEF38Q9NXL2 777 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 VANGL2Q9ULK5 521 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 SNX10Q9Y5X0 201 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 BZW2Q9Y6E2 419 aaKnown RBP9.54□□□□□ -0.88
SNHG1-215ENST00000540904 MYOFQ9NZM1 2061 aa9.54□□□□□ -0.88
SNHG1-215ENST00000540904 CCDC163A0A0D9SF12 145 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 TCRBV5S1A1TA0A578 114 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 PRR23AA6NEV1 266 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 I6L893 689 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 TIMM44O43615 452 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 GFRA3O60609 400 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 ALDH1A2O94788 518 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 LUC7L3O95232 432 aaKnown RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 PLEKP08567 350 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 GPD1P21695 349 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 LMAN2Q12907 356 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 MAMLD1Q13495 774 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF234Q14588 700 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 LPAL2Q16609 132 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 FUT11Q495W5 492 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 FSCBQ5H9T9 825 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 HGSNATQ68CP4 663 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 DCUN1D2Q6PH85 259 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 WDR59Q6PJI9 974 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 PRR23BQ6ZRT6 265 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 CEP68Q76N32 757 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 BNIPLQ7Z465 357 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 C14orf80Q86SX3 495 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 VPS36Q86VN1 386 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 VSTM4Q8IW00 320 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 CCAR2Q8N163 923 aaKnown RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 PGBD3Q8N328 593 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 MDGA1Q8NFP4 955 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 WFIKKN2Q8TEU8 576 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 FAM172AQ8WUF8 416 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 CYB5D2Q8WUJ1 264 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 HMGB4Q8WW32 186 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 IGSF8Q969P0 613 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 VCPIP1Q96JH7 1222 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 TPSD1Q9BZJ3 242 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 TRIM5Q9C035 493 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 PARVAQ9NVD7 372 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 TMEM51Q9NW97 253 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 BCCIPQ9P287 314 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 THAP10Q9P2Z0 257 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-215ENST00000540904 EBF1Q9UH73 591 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 ADAMTS1Q9UHI8 967 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 PLA2G4CQ9UP65 541 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 RAD54BQ9Y620 910 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 STON1Q9Y6Q2 735 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 CACNA1HO95180 2353 aa9.53□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 A0A1B0GVM2 712 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 A0A1W2PQF6 199 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 TCAF2A6NFQ2 919 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 NPC1O15118 1278 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 SYNCRIPO60506 623 aaKnown RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 SRGAP2O75044 1071 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 RTN2O75298 545 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 RPP40O75818 363 aaKnown RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ENDOD1O94919 500 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ATP5BP06576 529 aaKnown RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 TPM1P09493 284 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 GZMAP12544 262 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 CNR2P34972 360 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 CSKP41240 450 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 IL12RB1P42701 662 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 PTPN9P43378 593 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 NUMBP49757 651 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 IRAK1P51617 712 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF143P52747 638 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 HDAC4P56524 1084 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF177Q13360 481 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 TRIM14Q14142 442 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 SIM2Q14190 667 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 E2F5Q15329 346 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ARL13BQ3SXY8 428 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 FNDC3BQ53EP0 1204 aaKnown RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 KIAA1211LQ6NV74 962 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 SERPINA13PQ6UXR4 307 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 LRRC31Q6UY01 552 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 STRADAQ7RTN6 431 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 KIAA0907Q7Z7F0 614 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 GAB3Q8WWW8 586 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF653Q96CK0 615 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 LMLNQ96KR4 655 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 C1orf74Q96LT6 269 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 HAPLN3Q96S86 360 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 GABRG3Q99928 467 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 RBSNQ9H1K0 784 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 EPC1Q9H2F5 836 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms