RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 NXPE2Q96DL1 559 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 GDF3Q9NR23 364 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 RMND1Q9NWS8 449 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 FZD4Q9ULV1 537 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 COQ4Q9Y3A0 265 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 CEP83Q9Y592 693 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 A0A1W2PP55 124 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 O00370 1275 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 SLC16A3O15427 465 aaKnown RBP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 SIN3BO75182 1162 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 ZNF202O95125 648 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 LTFP02788 710 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 IGHV4-34P06331 123 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 SRPRAP08240 638 aaKnown RBP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 PAEPP09466 180 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 NNMTP40261 264 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 CSKP41240 450 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 ARRB1P49407 418 aaPredicted RBP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 RGS7P49802 495 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 NUCB2P80303 420 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 FKBP3Q00688 224 aaKnown RBP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 LRMPQ12912 555 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 CBWD6Q4V339 395 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 CBWD3Q5JTY5 395 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 KCNT1Q5JUK3 1230 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 CBWD5Q5RIA9 395 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 NCEH1Q6PIU2 408 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 LCLAT1Q6UWP7 414 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 SND1Q7KZF4 910 aaKnown RBP eCLIP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 GATAD2AQ86YP4 633 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 ZC3H3Q8IXZ2 948 aaKnown RBP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 CNDP2Q96KP4 475 aaKnown RBP12.95□□□□□ -0.34
COPS7A-211ENST00000540408 SLC6A18Q96N87 628 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 NEUROG2Q9H2A3 272 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 ADAMTS1Q9UHI8 967 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 ATP6V1DQ9Y5K8 247 aa12.95□□□□□ -0.34
COPS7A-211ENST00000540408 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 PLK4O00444 970 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 MID1O15344 667 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 RRP8O43159 456 aaKnown RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 RFPL3O75679 317 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 FBXO21O94952 628 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 SLC6A4P31645 630 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 SLC8A1P32418 973 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 CCR5P51681 352 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 CETN1Q12798 172 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 ARID5BQ14865 1188 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 CNGA2Q16280 664 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 PKDCCQ504Y2 493 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 FAM133BQ5BKY9 247 aaKnown RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 PRAMEF14Q5SWL7 426 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 PMF1Q6P1K2 205 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 OXR1Q8N573 874 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 SLC35F5Q8WV83 523 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 HSFY1Q96LI6 401 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 SERPINB11Q96P15 392 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 UBL7Q96S82 380 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 ORAI3Q9BRQ5 295 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 TRIM62Q9BVG3 475 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 SCAND2PQ9GZW5 306 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 MTG2Q9H4K7 406 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 ARMCX3Q9UH62 379 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-211ENST00000540408 ERVW-1Q9UQF0 538 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 PCDHB4Q9Y5E5 795 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 AK5Q9Y6K8 562 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 NBEAQ8NFP9 2946 aa12.94□□□□□ -0.34
COPS7A-211ENST00000540408 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
COPS7A-211ENST00000540408 FASNP49327 2511 aaKnown RBP12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3DA0A087WVF3 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3IA0A087WXS9 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3EA0A087X179 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3KA0A087X1G2 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 A0A1W2PQ27 194 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 A0A1W2PQ64 194 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3FA6NER0 549 aaPredicted RBP12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3LB9A6J9 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 M0QYV0 167 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 PIK3R2O00459 728 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 CAPN9O14815 690 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
COPS7A-211ENST00000540408 MAGEC1O60732 1142 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 ADH1BP00325 375 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3HP0C7X1 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 GOT1P17174 413 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 C5AR1P21730 350 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 ECT2LQ008S8 904 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 NUMA1Q14980 2115 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 MS4A13Q5J8X5 152 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 C9orf64Q5T6V5 341 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3GQ6DHY5 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3CQ6IPX1 549 aa12.93□□□□□ -0.34
COPS7A-211ENST00000540408 TBC1D3Q8IZP1 549 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms