RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 EDDM13A0A1B0GTR0 161 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 LRRC72A6NJI9 287 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 GJB3O75712 270 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 TOP3BO95985 862 aaKnown RBP15.84■□□□□ 0.13
UBE3B-211ENST00000539843 FTH1P19P0C7X4 201 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 ACSL1P33121 698 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 CSKP41240 450 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 GRIA4P48058 902 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 RPL34P49207 117 aaKnown RBP15.84■□□□□ 0.13
UBE3B-211ENST00000539843 SGSHP51688 502 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 C21orf59P57076 290 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 CDK17Q00537 523 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 SULT2A1Q06520 285 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 HLA-BQ31612 363 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 HNRNPA1L2Q32P51 320 aaKnown RBP15.84■□□□□ 0.13
UBE3B-211ENST00000539843 RABGAP1LQ5R372 815 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 SMYD5Q6GMV2 418 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 GBP6Q6ZN66 633 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 TAC4Q86UU9 113 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 LGI2Q8N0V4 545 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 ADAM32Q8TC27 787 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 TTC17Q96AE7 1141 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 KREMEN1Q96MU8 473 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 OMDQ99983 421 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 ZSWIM1Q9BR11 485 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 PABPC3Q9H361 631 aaKnown RBP15.84■□□□□ 0.13
UBE3B-211ENST00000539843 C6orf106Q9H6K1 298 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-211ENST00000539843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.84■□□□□ 0.13
UBE3B-211ENST00000539843 FBXL12Q9NXK8 326 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 RWDD2AQ9UIY3 292 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 KLK13Q9UKR3 277 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 CNTN6Q9UQ52 1028 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 PCDH15Q96QU1 1955 aa15.84■□□□□ 0.13
UBE3B-211ENST00000539843 KMT2BQ9UMN6 2715 aaPredicted RBP15.83■□□□□ 0.13
UBE3B-211ENST00000539843 TARSL2A2RTX5 802 aaKnown RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 E5RJQ4 531 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 DFNA5O60443 496 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 TRUB2O95900 331 aaKnown RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 GLI1P08151 1106 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 TACR2P21452 398 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 CD27P26842 260 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 SLC12A1Q13621 1099 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 DCAF6Q58WW2 860 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 NADSYN1Q6IA69 706 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 DENND1BQ6P3S1 775 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 FAM114A1Q8IWE2 563 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 DHX40Q8IX18 779 aaKnown RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 CHCHD4Q8N4Q1 142 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 WFDC5Q8TCV5 224 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 ZNF606Q8WXB4 792 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 GATA6Q92908 595 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 SLC39A13Q96H72 371 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 PRICKLE1Q96MT3 831 aaPredicted RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 SLC4A5Q9BY07 1137 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 ACE2Q9BYF1 805 aaPredicted RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 NUCKS1Q9H1E3 243 aaKnown RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 RSPH9Q9H1X1 276 aaPredicted RBP15.83■□□□□ 0.12
UBE3B-211ENST00000539843 SYNCQ9H7C4 482 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 PCOLCE2Q9UKZ9 415 aa15.83■□□□□ 0.12
UBE3B-211ENST00000539843 CKAP5Q14008 2032 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 A0A1B0GVT2 93 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 FAM47DPA6NHR8 397 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 HSF2BPO75031 334 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 SIN3BO75182 1162 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 GABBR2O75899 941 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 ADH1BP00325 375 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CALCAP01258 141 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 BMP6P22004 513 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CCR1P32246 355 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 MTIF2P46199 727 aaKnown RBP15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CSNK1EP49674 416 aaKnown RBP15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CCT8P50990 548 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 ECT2LQ008S8 904 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 PTK2Q05397 1052 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 PDCLQ13371 301 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CST6Q15828 149 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 ARHGAP44Q17R89 818 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 EXOC3L4Q17RC7 722 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 SLC45A4Q5BKX6 768 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 PITRM1Q5JRX3 1037 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 EFHC1Q5JVL4 640 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 RAP1GAP2Q684P5 730 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 KIAA0895LQ68EN5 471 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 TRIM65Q6PJ69 517 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 RAB44Q7Z6P3 723 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-211ENST00000539843 TMEM110Q86TL2 294 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CFAP52Q8N1V2 620 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 RHBDD1Q8TEB9 315 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 ADAMTS14Q8WXS8 1223 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 BIRC7Q96CA5 298 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 CAMK1GQ96NX5 476 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 TM9SF3Q9HD45 589 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 APEX2Q9UBZ4 518 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 ERVW-1Q9UQF0 538 aa15.82■□□□□ 0.12
UBE3B-211ENST00000539843 FNDC3AQ9Y2H6 1198 aaKnown RBP15.82■□□□□ 0.12
UBE3B-211ENST00000539843 GTPBP10A4D1E9 387 aaKnown RBP15.81■□□□□ 0.12
UBE3B-211ENST00000539843 KCNU1A8MYU2 1149 aa15.81■□□□□ 0.12
UBE3B-211ENST00000539843 PAPSS1O43252 624 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-211ENST00000539843 RNASEH2AO75792 299 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms