RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 C2orf42Q9NWW7 574 aa7.89□□□□□ -1.15
GNE-205ENST00000539815 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
GNE-205ENST00000539815 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 METTL12A8MUP2 240 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 E9PAM4 449 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TMX2-CTNND1H3BSU7 103 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 ARHGAP6O43182 974 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TGM1P22735 817 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 CD27P26842 260 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 EIF2S3P41091 472 aaKnown RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 NCKAP1LP55160 1127 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MYL6P60660 151 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TARDBPQ13148 414 aaKnown RBP eCLIP7.88□□□□□ -1.15
GNE-205ENST00000539815 ZNF177Q13360 481 aaPredicted RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 KIF19Q2TAC6 998 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MMAAQ8IVH4 418 aaKnown RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.88□□□□□ -1.15
GNE-205ENST00000539815 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 C1orf127Q8N9H9 656 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 ARHGEF26Q96DR7 871 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 SPDL1Q96EA4 605 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 PPP1R16AQ96I34 528 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TACO1Q9BSH4 297 aaKnown RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 PARD6BQ9BYG5 372 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 SCML1Q9UN30 329 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 DOCK5Q9H7D0 1870 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 IGHV1OR15-9A0A0B4J2B8 117 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 F5H5T6 163 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 F8VZ95 297 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MDM4O15151 490 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 CYP26A1O43174 497 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 COCHO43405 550 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 PABPC1P11940 636 aaKnown RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 OPRD1P41143 372 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 IL12RB1P42701 662 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 GTF2BQ00403 316 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 FUT11Q495W5 492 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 C3orf38Q5JPI3 329 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 PLA2G2CQ5R387 149 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 CBWD2Q8IUF1 395 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 HJURPQ8NCD3 748 aaPredicted RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 CADM4Q8NFZ8 388 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TPCN2Q8NHX9 752 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 HAPLN3Q96S86 360 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 COMMD8Q9NX08 183 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 ADAMTS1Q9UHI8 967 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 ADAM21Q9UKJ8 722 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 HPCAL4Q9UM19 191 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 CNTRLQ7Z7A1 2325 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TEX51A0A1B0GUA7 166 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 EIF3FO00303 357 aaPredicted RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 TBL1XO60907 577 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 C1SP09871 688 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 SLC8A1P32418 973 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MAN1A1P33908 653 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 GRIA4P48058 902 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 KCNH2Q12809 1159 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 RABGAP1LQ5R372 815 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MBLAC2Q68D91 279 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 MRGPRX1Q96LB2 322 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 ELF4Q99607 663 aaPredicted RBP7.88□□□□□ -1.15
GNE-205ENST00000539815 SLC2A11Q9BYW1 496 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 TRIM7Q9C029 511 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 PCED1AQ9H1Q7 454 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 CUEDC2Q9H467 287 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 FAM204AQ9H8W3 233 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 SLC39A2Q9NP94 309 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 SCUBE2Q9NQ36 999 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 LMBRD1Q9NUN5 540 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 VPS28Q9UK41 221 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 ERVW-1Q9UQF0 538 aa7.88□□□□□ -1.15
GNE-205ENST00000539815 SDC3O75056 442 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 KRT38O76015 456 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 DLDP09622 509 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 MXI1P50539 228 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 CLCN2P51788 898 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 NAA25Q14CX7 972 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 FBXL19Q6PCT2 694 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 INTS2Q9H0H0 1204 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 STN1Q9H668 368 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 EPB41L5Q9HCM4 733 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 A0A087WUV0 522 aaPredicted RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 WASH3PC4AMC7 463 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 MMEP08473 750 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 LCP1P13796 627 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 HMGA1P17096 107 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 WARSP23381 471 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 TPMTP51580 245 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 HNRNPKP61978 463 aaKnown RBP eCLIP7.87□□□□□ -1.15
GNE-205ENST00000539815 GABREP78334 506 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 SULT2A1Q06520 285 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 XKR4Q5GH76 650 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 MANEAQ5SRI9 462 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 CCNI2Q6ZMN8 369 aaPredicted RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 ATP6V0D2Q8N8Y2 350 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 CYB5D2Q8WUJ1 264 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 FEM1CQ96JP0 617 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 MYRFLQ96LU7 910 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms