RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SYBUQ9NX95 663 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 PAPSS1O43252 624 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 GCATO75600 419 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 PABPC4LP0CB38 370 aaKnown RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 MXD4Q14582 209 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 TMC7Q7Z402 723 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 ICA1LQ8NDH6 482 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 ZC3H15Q8WU90 426 aaKnown RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 ARNTL2Q8WYA1 636 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 EVPLQ92817 2033 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 CDCA5Q96FF9 252 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 OLFM3Q96PB7 478 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 LENG8Q96PV6 779 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 HAPLN3Q96S86 360 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 IRAK4Q9NWZ3 460 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 UBAP1Q9NZ09 502 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 DTLQ9NZJ0 730 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 PTPRFP10586 1907 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 A0A0G2JLL6 359 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 USP12O75317 370 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 AMHP03971 560 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 ATP6V1B1P15313 513 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 GOT1P17174 413 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 TPSB2P20231 275 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 CHN2P52757 468 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 BTKQ06187 659 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 TTLL12Q14166 644 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 TPSAB1Q15661 275 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 ANKRD20A4Q4UJ75 823 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 PRRT2Q7Z6L0 340 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 RIOX2Q8IUF8 465 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 APBB2Q92870 758 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 CMTM5Q96DZ9 223 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 MPP4Q96JB8 637 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 FZD8Q9H461 694 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 WDR55Q9H6Y2 383 aaPredicted RBP20.82■□□□□ 0.92
TMEM260-203ENST00000539559 MTMR10Q9NXD2 777 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 DTNAQ9Y4J8 743 aa20.82■□□□□ 0.92
TMEM260-203ENST00000539559 ALDH1A3P47895 512 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 IRF9Q00978 393 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 NCAPG2Q86XI2 1143 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 TP53INP2Q8IXH6 220 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 COLGALT1Q8NBJ5 622 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 ATP2A3Q93084 1043 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 KCTD15Q96SI1 283 aaPredicted RBP20.81■□□□□ 0.92
TMEM260-203ENST00000539559 DNAJC28Q9NX36 388 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 APPL1Q9UKG1 709 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 BARX2Q9UMQ3 279 aaPredicted RBP20.81■□□□□ 0.92
TMEM260-203ENST00000539559 SOWAHBA6NEL2 793 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 CCDC160A6NGH7 325 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 CXCL11O14625 94 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 SMIM18P0DKX4 95 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 PMLP29590 882 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 EPHX2P34913 555 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 MBTD1Q05BQ5 628 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 KLF10Q13118 480 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 GRM2Q14416 872 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 AMHR2Q16671 573 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 EFCAB12Q6NXP0 572 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 LCLAT1Q6UWP7 414 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 KBTBD6Q86V97 674 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 COPS5Q92905 334 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 ZNF670Q9BS34 389 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 HESX1Q9UBX0 185 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 HES2Q9Y543 173 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 CPA3P15088 417 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 NUDT2P50583 147 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 PKNOX1P55347 436 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 MRPS22P82650 360 aaKnown RBP20.81■□□□□ 0.92
TMEM260-203ENST00000539559 SEMA5AQ13591 1074 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 SLC10A6Q3KNW5 377 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 OPTNQ96CV9 577 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 DCUN1D1Q96GG9 259 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 CSPG4P5Q96PW8 444 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 AP4E1Q9UPM8 1137 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 COMMD3-BMI1R4GMX3 469 aa20.81■□□□□ 0.92
TMEM260-203ENST00000539559 SYNJ2BP-COX16A0A087WUM0 186 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 INHBCP55103 352 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 SLC6A3Q01959 620 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 PDCD2Q16342 344 aaPredicted RBP20.8■□□□□ 0.92
TMEM260-203ENST00000539559 NME8Q8N427 588 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 C7orf31Q8N865 590 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 NDRG1Q92597 394 aaKnown RBP20.8■□□□□ 0.92
TMEM260-203ENST00000539559 USP13Q92995 863 aaPredicted RBP20.8■□□□□ 0.92
TMEM260-203ENST00000539559 MRPL45Q9BRJ2 306 aaKnown RBP20.8■□□□□ 0.92
TMEM260-203ENST00000539559 SPATC1LQ9H0A9 340 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 COX16Q9P0S2 106 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 DCDC2Q9UHG0 476 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 NME7Q9Y5B8 376 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 PAPPA2Q9BXP8 1791 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 hCG_2014768A0A024R1R8 64 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 CFLARO15519 480 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 HSPA4LO95757 839 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 ATP5BP06576 529 aaKnown RBP20.8■□□□□ 0.92
TMEM260-203ENST00000539559 PSMB4P28070 264 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 FDFT1P37268 417 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 MTTPP55157 894 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 EML3Q32P44 896 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 NCBP2-AS2Q69YL0 99 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 RBM44Q6ZP01 1051 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms