RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 PLVAPQ9BX97 442 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 KLF16Q9BXK1 252 aaPredicted RBP6.48□□□□□ -1.37
MDM2-225ENST00000539479 CALN1Q9BXU9 219 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 FUT8Q9BYC5 575 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 OSBPL2Q9H1P3 480 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 DPH5Q9H2P9 285 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 NKX2-4Q9H2Z4 354 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 FBXO44Q9H4M3 255 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 FAM204AQ9H8W3 233 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 CERS4Q9HA82 394 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 MRPL17Q9NRX2 175 aaKnown RBP6.48□□□□□ -1.37
MDM2-225ENST00000539479 ABCC13Q9NSE7 274 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 EVA1BQ9NVM1 165 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 COMMD8Q9NX08 183 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 FAM53CQ9NYF3 392 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 RRN3Q9NYV6 651 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 CLIC5Q9NZA1 410 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.48□□□□□ -1.37
MDM2-225ENST00000539479 MTUS1Q9ULD2 1270 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 STAP1Q9ULZ2 295 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 NFU1Q9UMS0 254 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 MAGED2Q9UNF1 606 aaPredicted RBP6.48□□□□□ -1.37
MDM2-225ENST00000539479 SNX24Q9Y343 169 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.48□□□□□ -1.37
MDM2-225ENST00000539479 PCDHB12Q9Y5F1 795 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 HS3ST4Q9Y661 456 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 MTCL1Q9Y4B5 1905 aaKnown RBP6.48□□□□□ -1.37
MDM2-225ENST00000539479 TNRC18O15417 2968 aaPredicted RBP6.48□□□□□ -1.37
MDM2-225ENST00000539479 DOCK4Q8N1I0 1966 aa6.48□□□□□ -1.37
MDM2-225ENST00000539479 LAMA3Q16787 3333 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 IGLV3-10A0A075B6K4 115 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 TCRBV7S3A2A0A539 114 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CCDC151A5D8V7 595 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 H3BNC9 293 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 RFXAPO00287 272 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 MAP2K7O14733 419 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CAPN9O14815 690 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 TLR5O60602 858 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 RFPL2O75678 378 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 STC2O76061 302 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CNTN5O94779 1100 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 PAPLNO95428 1278 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 GJA1P17302 382 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 ERCC2P18074 760 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 RPL22P35268 128 aaKnown RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 CHKAP35790 457 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 TUFMP49411 452 aaKnown RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 EPHA5P54756 1037 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 NTHL1P78549 312 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CYP4F8P98187 520 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 NRG1Q02297 640 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 KRT17Q04695 432 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 DHX34Q14147 1143 aaKnown RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 KRT81Q14533 505 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 IHHQ14623 411 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 PPP2R5DQ14738 602 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 BRD3Q15059 726 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 PAFAH1B3Q15102 231 aaKnown RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 PRKD1Q15139 912 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 TRIP4Q15650 581 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 ALFQ53S48 1182 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 MS4A13Q5J8X5 152 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 BRMS1LQ5PSV4 323 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 ANKRD22Q5VYY1 191 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CIR1Q86X95 450 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 KREMEN2Q8NCW0 462 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 FBXO25Q8TCJ0 367 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 GDPD5Q8WTR4 605 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 ZBTB9Q96C00 473 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 RTP4Q96DX8 246 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CEP295NLQ96MC4 621 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 PRICKLE1Q96MT3 831 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 GDAP1L1Q96MZ0 367 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 QKIQ96PU8 341 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■■□□ 15.4
MDM2-225ENST00000539479 HAPLN3Q96S86 360 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CYP2S1Q96SQ9 504 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 NAP1L3Q99457 506 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 LBHD1Q9BQE6 289 aaPredicted RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 TRIM31Q9BZY9 425 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 PLAC1Q9HBJ0 212 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 TLR9Q9NR96 1032 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.47□□□□□ -1.37
MDM2-225ENST00000539479 GKN1Q9NS71 199 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CDH22Q9UJ99 828 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 DRG1Q9Y295 367 aaKnown RBP6.47□□□□□ -1.37
MDM2-225ENST00000539479 TLR6Q9Y2C9 796 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 PCDHA11Q9Y5I1 949 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 HCFC2Q9Y5Z7 792 aa6.47□□□□□ -1.37
MDM2-225ENST00000539479 CHD5Q8TDI0 1954 aa6.46□□□□□ -1.37
MDM2-225ENST00000539479 SLC12A8A0AV02 714 aa6.46□□□□□ -1.38
MDM2-225ENST00000539479 BCLAF3A2AJT9 711 aaKnown RBP6.46□□□□□ -1.38
MDM2-225ENST00000539479 WASH4PA8MWX3 477 aa6.46□□□□□ -1.38
MDM2-225ENST00000539479 E9PAM4 449 aa6.46□□□□□ -1.38
MDM2-225ENST00000539479 AGPSO00116 658 aa6.46□□□□□ -1.38
MDM2-225ENST00000539479 EEF2KO00418 725 aaKnown RBP6.46□□□□□ -1.38
MDM2-225ENST00000539479 APOL1O14791 398 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms