RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TXNDC5Q8NBS9 432 aaKnown RBP16.27■□□□□ 0.19
RPAIN-206ENST00000539417 RPRD1AQ96P16 312 aaPredicted RBP16.27■□□□□ 0.19
RPAIN-206ENST00000539417 HHIPQ96QV1 700 aa16.27■□□□□ 0.19
RPAIN-206ENST00000539417 PEBP4Q96S96 227 aa16.27■□□□□ 0.19
RPAIN-206ENST00000539417 CNPY3Q9BT09 278 aa16.27■□□□□ 0.19
RPAIN-206ENST00000539417 SLC2A11Q9BYW1 496 aa16.27■□□□□ 0.19
RPAIN-206ENST00000539417 ZNHIT6Q9NWK9 470 aaKnown RBP16.27■□□□□ 0.19
RPAIN-206ENST00000539417 STARD13Q9Y3M8 1113 aa16.27■□□□□ 0.19
RPAIN-206ENST00000539417 MYO18AQ92614 2054 aaKnown RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 CYP1A2P05177 515 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 TCF4P15884 667 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 PSMA2P25787 234 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 CCR3P51677 355 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 MRPS21P82921 87 aaKnown RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 DMC1Q14565 340 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 FUT11Q495W5 492 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 C5orf22Q49AR2 442 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 CXorf57Q6NSI4 855 aaKnown RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 SCYL2Q6P3W7 929 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 ANKS1BQ7Z6G8 1248 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 MFN1Q8IWA4 741 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 CCAR2Q8N163 923 aaKnown RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF513Q8N8E2 541 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 FIBINQ8TAL6 211 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 CYB5D2Q8WUJ1 264 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 DEF6Q9H4E7 631 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 GPATCH2LQ9NWQ4 482 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 MPP6Q9NZW5 540 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 GGA2Q9UJY4 613 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 MMP17Q9ULZ9 603 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 NEU3Q9UQ49 428 aa16.26■□□□□ 0.19
RPAIN-206ENST00000539417 MUC22E2RYF6 1773 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-206ENST00000539417 E9PAM4 449 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 AKR1B10O60218 316 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 SRGAP2O75044 1071 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 MYBL1P10243 752 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 PABPC1P11940 636 aaKnown RBP16.25■□□□□ 0.19
RPAIN-206ENST00000539417 MZF1P28698 734 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-206ENST00000539417 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-206ENST00000539417 CHST9Q7L1S5 443 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 SYT13Q7L8C5 426 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 APCDD1Q8J025 514 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 SPC24Q8NBT2 197 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 C1orf74Q96LT6 269 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 CCDC42Q96M95 316 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 HAPLN3Q96S86 360 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 IER2Q9BTL4 223 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 NUP85Q9BW27 656 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 ELOVL2Q9NXB9 296 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 CACNA2D2Q9NY47 1150 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 TFR2Q9UP52 801 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 RAD54BQ9Y620 910 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 R4GN57 208 aa16.25■□□□□ 0.19
RPAIN-206ENST00000539417 ANKRD62A6NC57 917 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 DRGXA6NNA5 263 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 H0Y626 953 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 PAPSS2O95340 614 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-206ENST00000539417 CTSOP43234 321 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-206ENST00000539417 CA9Q16790 459 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 TSR1Q2NL82 804 aaKnown RBP16.24■□□□□ 0.19
RPAIN-206ENST00000539417 MANEALQ5VSG8 457 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 HEATR6Q6AI08 1181 aaKnown RBP16.24■□□□□ 0.19
RPAIN-206ENST00000539417 KIAA1211LQ6NV74 962 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 CIPCQ9C0C6 399 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF212Q9UDV6 495 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 PCSK1NQ9UHG2 260 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 FBXO4Q9UKT5 387 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 FZD10Q9ULW2 581 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 SCINQ9Y6U3 715 aa16.24■□□□□ 0.19
RPAIN-206ENST00000539417 IGLV3-10A0A075B6K4 115 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 CSKP41240 450 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 IL12RB1P42701 662 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 FNTBP49356 437 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 PTPN5P54829 565 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 NHLH1Q02575 133 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 CDH18Q13634 790 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 CRY1Q16526 586 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 PTPRNQ16849 979 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 RABGAP1LQ5R372 815 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 MBLAC2Q68D91 279 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 TFAP2DQ7Z6R9 452 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 FNIP1Q8TF40 1166 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 NELL1Q92832 810 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 NTAN1Q96AB6 310 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 ALG14Q96F25 216 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 PRRX2Q99811 253 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 KCNH6Q9H252 994 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 CD248Q9HCU0 757 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 OSGEPQ9NPF4 335 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 NDFIP2Q9NV92 336 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-206ENST00000539417 OR12D3Q9UGF7 316 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 PAXBP1Q9Y5B6 917 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 FRYLO94915 3013 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 DOCK4Q8N1I0 1966 aa16.23■□□□□ 0.19
RPAIN-206ENST00000539417 A0A1B0GVM2 712 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms