RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ASIC3Q9UHC3 531 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 MSRAQ9UJ68 235 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 FBXW11Q9UKB1 542 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 ZNF148Q9UQR1 794 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 SZT2Q5T011 3432 aa9.13□□□□□ -0.95
DDB1-213ENST00000539332 NYNRINQ9P2P1 1898 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 BRWD1Q9NSI6 2320 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 C2orf71A6NGG8 1288 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 HIDE1A8MVS5 230 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 H3BNC9 293 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 I6L893 689 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 DNALI1O14645 258 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 NDC80O14777 642 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 APOL1O14791 398 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 MCF2LO15068 1137 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 CSPG5O95196 566 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ADH1AP07327 375 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 NCAM1P13591 858 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ATF6P18850 670 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 HPDP32754 393 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 ADRA1BP35368 520 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 HCAR3P49019 387 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 TUFMP49411 452 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 DYNLT1P63172 113 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 DPYSQ14117 519 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PLPP4Q5VZY2 271 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PPP2R2DQ66LE6 453 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 STKLD1Q8NE28 680 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 SLC7A14Q8TBB6 771 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 GPR152Q8TDT2 470 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 DQX1Q8TE96 717 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 HAUS1Q96CS2 278 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 OLFM3Q96PB7 478 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 TMEM121Q9BTD3 319 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 FOXP3Q9BZS1 431 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 STMN4Q9H169 189 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 NKX2-4Q9H2Z4 354 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 SMOC2Q9H3U7 446 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 CERS4Q9HA82 394 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ABCC13Q9NSE7 274 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 SAE1Q9UBE0 346 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 MTRF1LQ9UGC7 380 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 MAFFQ9ULX9 164 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 NFS1Q9Y697 457 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PRRC2BQ5JSZ5 2229 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 CFAP69A5D8W1 941 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 CCT8L1PA6NM43 557 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PRRG1O14668 218 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 CAPN9O14815 690 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 IRAK2O43187 625 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 NEBLO76041 1014 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 LUC7L3O95232 432 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 ATP6V1G2O95670 118 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 RBP3P10745 1247 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 IRS1P35568 1242 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 NR2C2P49116 596 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ITGA8P53708 1063 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 GDF10P55107 478 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 EIF3EP60228 445 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 YWHAGP61981 247 aaKnown RBP eCLIP9.12□□□□□ -0.95
DDB1-213ENST00000539332 USP46P62068 366 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 DHX9Q08211 1270 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 CALCOCO2Q13137 446 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 CBLBQ13191 982 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 GPM6BQ13491 265 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 EFHC2Q5JST6 749 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ARTNQ5T4W7 220 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 NCBP2-AS2Q69YL0 99 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 HIBCHQ6NVY1 386 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 NPNTQ6UXI9 565 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 DENND5BQ6ZUT9 1274 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 MON1AQ86VX9 555 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 APLFQ8IW19 511 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 TCEAL8Q8IYN2 117 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PYROXD2Q8N2H3 581 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 GBP7Q8N8V2 638 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 SPACA7Q96KW9 195 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 KLHL5Q96PQ7 755 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 TTLL2Q9BWV7 592 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 EMILIN2Q9BXX0 1053 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 MAK16Q9BXY0 300 aaKnown RBP9.12□□□□□ -0.95
DDB1-213ENST00000539332 MAGEB5Q9BZ81 275 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PHACTR1Q9C0D0 580 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 PRO3102Q9H379 93 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 EBF2Q9HAK2 575 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 SLC28A3Q9HAS3 691 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 CYP4F11Q9HBI6 524 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 USP29Q9HBJ7 922 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ANLNQ9NQW6 1124 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 DDIT4Q9NX09 232 aa9.12□□□□□ -0.95
DDB1-213ENST00000539332 SHOC2Q9UQ13 582 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms