RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CDKN2BP42772 138 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 TNK2Q07912 1038 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 PDGFRLQ15198 375 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 RABGAP1LQ5R372 815 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 TMEM25Q86YD3 366 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 ADHFE1Q8IWW8 467 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 ADGRG2Q8IZP9 1017 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 TRMT61BQ9BVS5 477 aaKnown RBP24.24■■□□□ 1.47
TMEM260-202ENST00000538838 SPHK2Q9NRA0 654 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 SNX12Q9UMY4 172 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 CNTN5O94779 1100 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 CYP17A1P05093 508 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 ZP2Q05996 745 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 DPYSQ14117 519 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 C5orf22Q49AR2 442 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 ALFQ53S48 1182 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 LY6G5CQ5SRR4 150 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 HJURPQ8NCD3 748 aaPredicted RBP24.23■■□□□ 1.47
TMEM260-202ENST00000538838 ATP2A3Q93084 1043 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 FAF2Q96CS3 445 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 CARD9Q9H257 536 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 HPS4Q9NQG7 708 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 PLK2Q9NYY3 685 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 STIM2Q9P246 746 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 RCOR3Q9P2K3 495 aaPredicted RBP24.23■■□□□ 1.47
TMEM260-202ENST00000538838 PPARGC1AQ9UBK2 798 aaKnown RBP24.23■■□□□ 1.47
TMEM260-202ENST00000538838 MIA3Q5JRA6 1907 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 MYO10Q9HD67 2058 aa24.23■■□□□ 1.47
TMEM260-202ENST00000538838 CHADO15335 359 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 TBL1XO60907 577 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 HTR7P34969 479 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 ZNF135P52742 658 aaPredicted RBP24.22■■□□□ 1.47
TMEM260-202ENST00000538838 TAZQ16635 292 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 ANKRD20A8PQ5CZ79 823 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 PCDH19Q8TAB3 1148 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 DDI1Q8WTU0 396 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 IRF7Q92985 503 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 OSBPL9Q96SU4 736 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 ZYG11BQ9C0D3 744 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 ARHGEF4Q9NR80 690 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 IGSF9Q9P2J2 1179 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 PRKAG3Q9UGI9 489 aa24.22■■□□□ 1.47
TMEM260-202ENST00000538838 hCG_1818297A0A087WSY0 165 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 DRGXA6NNA5 263 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 DAPK3O43293 454 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ZNF500O60304 480 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 NFATC1O95644 943 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 KRT10P13645 584 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 AMPD1P23109 780 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 DHCR24Q15392 516 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 MPPE1Q53F39 396 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 TFDP3Q5H9I0 405 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 PAPD7Q5XG87 772 aaKnown RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 KAZNQ674X7 775 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 RHBDF2Q6PJF5 856 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 TFAP2DQ7Z6R9 452 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 VSIG1Q86XK7 387 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ATXN2LQ8WWM7 1075 aaKnown RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ZNF592Q92610 1267 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 NXPE3Q969Y0 559 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 TMA16Q96EY4 203 aaKnown RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 HERPUD2Q9BSE4 406 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 MFHAS1Q9Y4C4 1052 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 KIAA1549LQ6ZVL6 1849 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 TYW5A2RUC4 315 aaKnown RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 OTOL1A6NHN0 477 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ZNF487B1APH4 448 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 NEDD8-MDP1E9PL57 170 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 KIF2AO00139 706 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 CYBBP04839 570 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ERCC2P18074 760 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 HOXD9P28356 352 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 HCAR3P49019 387 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 COPS2P61201 443 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 PPP2R5EQ16537 467 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ANO4Q32M45 955 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 SEL1L2Q5TEA6 688 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 TTC39BQ5VTQ0 682 aaPredicted RBP24.21■■□□□ 1.47
TMEM260-202ENST00000538838 FYB2Q5VWT5 728 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 RFX6Q8HWS3 928 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 SLC44A3Q8N4M1 653 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 RNF157Q96PX1 679 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 BBS2Q9BXC9 721 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 HEMGNQ9BXL5 484 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 BRD9Q9H8M2 597 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ETNK2Q9NVF9 386 aa24.21■■□□□ 1.47
TMEM260-202ENST00000538838 ARNTLO00327 626 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 FGF10O15520 208 aaPredicted RBP24.2■■□□□ 1.46
TMEM260-202ENST00000538838 NLRP14Q86W24 1093 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 PQLC3Q8N755 202 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 TTC8Q8TAM2 541 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 COG1Q8WTW3 980 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 OSBPL8Q9BZF1 889 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 CATSPERBQ9H7T0 1116 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 ECT2Q9H8V3 914 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 GTSE1Q9NYZ3 720 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 MARK1Q9P0L2 795 aa24.2■■□□□ 1.46
TMEM260-202ENST00000538838 A0A1B0GVM2 712 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 TCAF2A6NFQ2 919 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 DCLK1O15075 740 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms