RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PYDC1Q8WXC3 89 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ZHX1-C8orf76Q96EF9 292 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ADGRE3Q9BY15 652 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 UBP1Q9NZI7 540 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 USP21Q9UK80 565 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 TNPO3Q9Y5L0 923 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 FAM237AA0A1B0GTK4 181 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 E2F8A0AVK6 867 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 HAT1O14929 419 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 MAGEC1O60732 1142 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 KLHL18O94889 574 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PCSK2P16519 638 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ELK3P41970 407 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 HARS2P49590 506 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 RENBPP51606 427 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 CASP5P51878 434 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 Q3C1V9 767 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ABRAQ8N0Z2 381 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 SPATA17Q96L03 361 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 TEKT5Q96M29 485 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 CDK5RAP1Q96SZ6 601 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 SEPHS2Q99611 448 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 TRIM39Q9HCM9 518 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 LEF1Q9UJU2 399 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 LRRC10BA6NIK2 292 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 RPA3P35244 121 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 TAF6P49848 677 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 AUHQ13825 339 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 GIT2Q14161 759 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 LRRC38Q5VT99 294 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PRR23CQ6ZRP0 262 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 USP49Q70CQ1 688 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 CHMP1BQ7LBR1 199 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 EZH1Q92800 747 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 MTMR8Q96EF0 704 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 NARS2Q96I59 477 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 CHST12Q9NRB3 414 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 NFKBIL1Q9UBC1 381 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 NARFQ9UHQ1 456 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PLK4O00444 970 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 TRAFD1O14545 582 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 PLA2G6O60733 806 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ITGALP20701 1170 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PRKCIP41743 596 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 MMP13P45452 471 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PRKCEQ02156 737 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 CBX3Q13185 183 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 NR6A1Q15406 480 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 KDELC2Q7Z4H8 507 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 CLPBQ9H078 707 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 MAGEE1Q9HCI5 957 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 SCUBE2Q9NQ36 999 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PLK2Q9NYY3 685 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PSMD12O00232 456 aaPredicted RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 IFRD1O00458 451 aaPredicted RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 TPD52L2O43399 206 aaKnown RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 C21orf2O43822 256 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 ENTPD3O75355 529 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 STARP49675 285 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 MRPS22P82650 360 aaKnown RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 LZTR1Q8N653 840 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 EEF1AKMT1Q8WVE0 214 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 AGXT2Q9BYV1 514 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 ELOVL6Q9H5J4 265 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 AASDHPPTQ9NRN7 309 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 NUDT5Q9UKK9 219 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 UBQLN1Q9UMX0 589 aaKnown RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 CARD8Q9Y2G2 431 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 AP4B1Q9Y6B7 739 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 CASZ1Q86V15 1759 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 RRN3P2A6NIE6 340 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 C19orf81C9J6K1 198 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 HBP1O60381 514 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 CYP2A7P20853 494 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 POU1F1P28069 291 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 GCNT1Q02742 428 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 NFIAQ12857 509 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 ZSWIM7Q19AV6 140 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 ZFP69Q49AA0 526 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 OTUD3Q5T2D3 398 aaPredicted RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 FBXO39Q8N4B4 442 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 LRRC71Q8N4P6 559 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 FAM84BQ96KN1 310 aaPredicted RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 CPVLQ9H3G5 476 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 LRRC19Q9H756 370 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 PSMD13Q9UNM6 376 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 ALKQ9UM73 1620 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 A0A1W2PRG6 482 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 DDX3XO00571 662 aaKnown RBP eCLIP7.05□□□□□ -1.28
SORT1-209ENST00000538502 OGTO15294 1046 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 CPSF4O95639 269 aaKnown RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 SERPIND1P05546 499 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 CSF1RP07333 972 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 CYP19A1P11511 503 aaPredicted RBP7.05□□□□□ -1.28
SORT1-209ENST00000538502 ODC1P11926 461 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 NCAM1P13591 858 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 SLC2A4P14672 509 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 LBPP18428 481 aa7.05□□□□□ -1.28
SORT1-209ENST00000538502 FEN1P39748 380 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms